Evidence map›Paper›PMID 37141817›Full record

ArticleGynecologic oncology2023

Detection of endometrial cancer using tampon-based collection and methylated DNA markers.

Jamie N Bakkum-Gamez, Mark E Sherman, Seth W Slettedahl, Douglas W Mahoney, Maureen A Lemens, Shannon K Laughlin-Tommaso, Matthew R Hopkins, Ann VanOosten, Viji Shridhar, Julie K Staub and 14 more

2 registry-linked trialsOpen access · greenAbstract read
In one paragraph

Article in Gynecologic oncology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to 2 registered trials, which are not on this map. Cited by 13 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed, 1 pooled it
4.8field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT06846775 recruitingnot on this mapstarted 2025, after this paper: background citation

A Case-control Study of the Clinical Utility of DNA Methylation Testing in Patient-collected Vaginal and Urine Samples: A Novel, Patient-friendly and Simple Diagnostic Solution to Detect Endometrial Cancer.

Typeobservational_patient_registrySponsorUniversity of AarhusRan2025 to 2028Enrolled120ConditionsEndometrial CancerArmsDNA-methylation testing in patient-collected urine and vaginal samples
NCT07400835 recruitingnot on this mapstarted 2026, after this paper: background citation

The ENDOMETRIAL Study: EvaluatioN of DNA methylatiOn Markers for EndomeTrial Cancer Risk-stratification Using Patient-collected urIne and vAginal Samples and Clinician-collected Cervical Samples From Women With Postmenopausal bLeeding

Typeobservational_patient_registrySponsorUniversity of AarhusRan2026 to 2030Enrolled600ConditionsPostmenopausal BleedingArmsDNA-methylation testing in patient-collected urine and vaginal samples and clinician-collected cervical samples
3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 1 synthesis or guideline pooled it, 20 citations in OpenAlex.

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  3. A DNA methylation assay (MPap) using self-collected tampon versus cytology collection swab for endometrial cancer detection.International journal of gynaecology and obstetrics: the official organ of the International Federation of Gynaecology and Obstetrics · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors at 4 institutions in 1 country.

Jamie N Bakkum-GamezDepartment of Obstetrics and Gynecology, Division of Gynecologic Oncology Surgery, Mayo Clinic, Rochester, MN, United States of America. Electronic address: bakkum.jamie@mayo.edu.
Mark E ShermanQuantitative Health Sciences, Mayo Clinic, Jacksonville, FL, United States of America.
Seth W SlettedahlDepartment of Health Sciences Research, Division of Biomedical Statistics and Informatics, Mayo Clinic, Rochester, MN, United States of America.
Douglas W MahoneyDepartment of Health Sciences Research, Division of Biomedical Statistics and Informatics, Mayo Clinic, Rochester, MN, United States of America.
Maureen A LemensSurgery Research, Department of Obstetrics and Gynecology, Mayo Clinic, Rochester, MN, United States of America.
Shannon K Laughlin-TommasoDepartment of Obstetrics and Gynecology, Division of Gynecology, Mayo Clinic, Rochester, MN, United States of America.
Matthew R HopkinsDepartment of Obstetrics and Gynecology, Division of Gynecology, Mayo Clinic, Rochester, MN, United States of America.
Ann VanOostenSurgery Research, Department of Obstetrics and Gynecology, Mayo Clinic, Rochester, MN, United States of America.
Viji ShridharDepartment of Laboratory Medicine and Pathology, Experimental Pathology, Mayo Clinic, Rochester, MN, United States of America.
Julie K StaubDepartment of Laboratory Medicine and Pathology, Experimental Pathology, Mayo Clinic, Rochester, MN, United States of America.
Xiaoming CaoDepartment of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN, United States of America.
Patrick H FooteDepartment of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN, United States of America.
Megan A ClarkeDivision of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, MD, United States of America.
Kelli N BurgerDepartment of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN, United States of America.
Calise K BergerDepartment of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN, United States of America.
Maria C O'ConnellDepartment of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN, United States of America.
Karen A DoeringDepartment of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN, United States of America.
Karl C PodratzDepartment of Obstetrics and Gynecology, Division of Gynecologic Oncology Surgery, Mayo Clinic, Rochester, MN, United States of America.
Christopher C DeStephanoDepartment of Obstetrics and Gynecology, Division of Minimally Invasive Gynecology, Mayo Clinic, Jacksonville, FL, United States of America.
J Kenneth SchoolmeesterDepartment of Laboratory Medicine and Pathology, Anatomic Pathology, Mayo Clinic, Rochester, MN, United States of America.
Sarah E KerrHospital Pathology Associates, Minneapolis, MN, United States of America.
Nicolas WentzensenDivision of Cancer Epidemiology and Genetics, National Cancer Institute, Bethesda, MD, United States of America.
William R TaylorDepartment of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN, United States of America.
John B KisielDepartment of Gastroenterology and Hepatology, Mayo Clinic, Rochester, MN, United States of America.
Mayo Clinic in Arizona · USMayo Clinic · USMayo Clinic in Florida · USDivision of Cancer Epidemiology and Genetics

Funding

Women's Cancer ProgramP30CA015083 · NCI · MAYO CLINIC ROCHESTER · PI Lila J. Rutten · 1985 to 2026
$151.3M
Multi-site Gastrointestinal Cancer Detection by Stool DNA MethylationR37CA214679 · NCI · MAYO CLINIC ROCHESTER · PI KISIEL, JOHN · 2018 to 2024
$2.8M
Multi-cancer Early DetectionR01CA214679 · NCI · MAYO CLINIC ROCHESTER · PI John Kisiel, Niloy Jewel Samadder · 2025 to 2026
$891k
NCI NIH HHS P30 CA015083NCI NIH HHS R01 CA214679NCI NIH HHS R37 CA214679
6 · The paper itself

Abstract

objectiveAlterations in DNA methylation are early events in endometrial cancer (EC) development and may have utility in EC detection via tampon-collected vaginal fluid.

methodsFor discovery, DNA from frozen EC, benign endometrium (BE), and benign cervicovaginal (BCV) tissues underwent reduced representation bisulfite sequencing (RRBS) to identify differentially methylated regions (DMRs). Candidate DMRs were selected based on receiver operating characteristic (ROC) discrimination, methylation level fold-change between cancers and controls, and absence of background CpG methylation. Methylated DNA marker (MDM) validation was performed using qMSP on DNA from independent EC and BE FFPE tissue sets. Women ≥45 years of age with abnormal uterine bleeding (AUB) or postmenopausal bleeding (PMB) or any age with biopsy-proven EC self-collected vaginal fluid using a tampon prior to clinically indicated endometrial sampling or hysterectomy. Vaginal fluid DNA was assayed by qMSP for EC-associated MDMs. Random forest modeling analysis was performed to generate predictive probability of underlying disease; results were 500-fold in-silico cross-validated.

resultsThirty-three candidate MDMs met performance criteria in tissue. For the tampon pilot, 100 EC cases were frequency matched by menopausal status and tampon collection date to 92 BE controls. A 28-MDM panel highly discriminated between EC and BE (96% (95%CI 89-99%) specificity; 76% (66-84%) sensitivity (AUC 0.88). In PBS/EDTA tampon buffer, the panel yielded 96% (95% CI 87-99%) specificity and 82% (70-91%) sensitivity (AUC 0.91).

conclusionNext generation methylome sequencing, stringent filtering criteria, and independent validation yielded excellent candidate MDMs for EC. EC-associated MDMs performed with promisingly high sensitivity and specificity in tampon-collected vaginal fluid; PBS-based tampon buffer with added EDTA improved sensitivity. Larger tampon-based EC MDM testing studies are warranted.

Indexed as

Endometrial NeoplasmsDNADNA MethylationEdetic AcidEndometriumFemaleGenetic MarkersHumansDNAEdetic AcidGenetic MarkersCell-free nucleic acidsDNA methylationEndometrial cancerEndometrial neoplasm/diagnosisEndometrial neoplasm/prevention & controlLiquid biopsy

Identifiers

PMID37141817
PMCPMC10330802
OpenAlexW4367675297

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.