Evidence map›Paper›PMID 37158588›Full record

ArticleeLife2023

Insights into cargo sorting by SNX32 and its role in neurite outgrowth.

Jini Sugatha, Amulya Priya, Prateek Raj, Ebsy Jaimon, Uma Swaminathan, Anju Jose, Thomas John Pucadyil, Sunando Datta

Open access · goldAbstract read
In one paragraph

Article in eLife, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 18 citations in OpenAlex.

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  8. Identification of a VPS29 isoform with restricted association to Retriever and Retromer accessory proteins through autoinhibition.Proceedings of the National Academy of Sciences of the United States of America · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 4 countries.

Jini SugathaIndian Institute of Science Education and Research, Bhopal, Bhopal, India.ORCID 0000-0002-5628-4597
Amulya Priya *SickKids Research Institute, Hospital for Sick Children, Toronto, Canada.ORCID 0000-0001-8673-5371
Prateek Raj *Molecular Biophysics Unit, Indian Institute of Science Bangalore, Bangalore, India.
Ebsy Jaimon *Department of Biochemistry, Stanford University, Stanford, United States.ORCID 0000-0001-6845-2095
Uma SwaminathanIndian Institute of Science Education and Research Pune, Pune, India.
Anju JoseAmala Cancer Research Centre, Thrissur, India.
Thomas John PucadyilIndian Institute of Science Education and Research Pune, Pune, India.
Sunando DattaIndian Institute of Science Education and Research, Bhopal, Bhopal, India.ORCID 0000-0002-1417-0276
Indian Institute of Science Education and Research, Bhopal · INIndian Institute of Science Education and Research Pune · INIndian Institute of Science Bangalore · INMpala Research Center and Wildlife Foundation · KESickKids Foundation · CAStanford University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sorting nexins (SNX) are a family of proteins containing the Phox homology domain, which shows a preferential endo-membrane association and regulates cargo sorting processes. Here, we established that SNX32, an SNX-BAR (Bin/Amphiphysin/Rvs) sub-family member associates with SNX4 via its BAR domain and the residues A226, Q259, E256, R366 of SNX32, and Y258, S448 of SNX4 that lie at the interface of these two SNX proteins mediate this association. SNX32, via its PX domain, interacts with the transferrin receptor (TfR) and Cation-Independent Mannose-6-Phosphate Receptor (CIMPR), and the conserved F131 in its PX domain is important in stabilizing these interactions. Silencing of SNX32 leads to a defect in intracellular trafficking of TfR and CIMPR. Further, using SILAC-based differential proteomics of the wild-type and the mutant SNX32, impaired in cargo binding, we identified Basigin (BSG), an immunoglobulin superfamily member, as a potential interactor of SNX32 in SHSY5Y cells. We then demonstrated that SNX32 binds to BSG through its PX domain and facilitates its trafficking to the cell surface. In neuroglial cell lines, silencing of SNX32 leads to defects in neuronal differentiation. Moreover, abrogation in lactate transport in the SNX32-depleted cells led us to propose that SNX32 may contribute to maintaining the neuroglial coordination via its role in BSG trafficking and the associated monocarboxylate transporter activity. Taken together, our study showed that SNX32 mediates the trafficking of specific cargo molecules along distinct pathways.

Indexed as

EndosomesNeuronal OutgrowthCell MembraneProtein TransportSorting NexinsSorting Nexinsbasigincell biologyCIMPRHeLamonocarboxylate transporterNeuro2anonereceptor recyclingsorting nexintransferrin receptor

Identifiers

PMID37158588
PMCPMC10219652
OpenAlexW4375955901

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.