Evidence map›Paper›PMID 37184401›Full record

ArticleJournal of virology2023

Evaluation of Archival HIV DNA in Brain and Lymphoid Tissues.

Michelli F Oliveira, Alec Pankow, Thomas Vollbrecht, Nikesh M Kumar, Gemma Cabalero, Caroline Ignacio, Mitchell Zhao, Andrej Vitomirov, Ben Gouaux, Masato Nakawawa and 3 more

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 2 institutions in 2 countries.

Michelli F OliveiraDepartment of Medicine, University of California San Diego, La Jolla, California, USA.ORCID 0000-0001-5045-7939
Alec PankowDepartment of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Stockholm, Sweden.
Thomas VollbrechtDepartment of Medicine, University of California San Diego, La Jolla, California, USA.
Nikesh M KumarDepartment of Medicine, University of California San Diego, La Jolla, California, USA.
Gemma CabaleroDepartment of Medicine, University of California San Diego, La Jolla, California, USA.
Caroline IgnacioDepartment of Medicine, University of California San Diego, La Jolla, California, USA.
Mitchell ZhaoDepartment of Medicine, University of California San Diego, La Jolla, California, USA.
Andrej VitomirovDepartment of Medicine, University of California San Diego, La Jolla, California, USA.
Ben GouauxDepartment of Medicine, University of California San Diego, La Jolla, California, USA.
Masato NakawawaDepartment of Medicine, University of California San Diego, La Jolla, California, USA.
Ben MurrellDepartment of Medicine, University of California San Diego, La Jolla, California, USA.
Ronald J Ellis *Department of Neurosciences and Psychiatry, University of California San Diego, La Jolla, California, USA.
Sara Gianella *Department of Medicine, University of California San Diego, La Jolla, California, USA.ORCID 0000-0002-9927-0849
University of California San Diego · USKarolinska Institutet · SE

Funding

VIRAL MALIGNANCYP30CA023100 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Dwayne G. Stupack · 1985 to 2026
$124.9M
UC San Diego Clinical and Translational Research InstituteUL1TR001442 · NCATS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI FIRESTEIN, GARY S, HOGARTH, MICHAEL · 2015 to 2024
$88.3M
VirologyP30AI036214 · NIAID · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI SONIA JAIN · 1994 to 2026
$78.4M
STRUCTURAL NEUROIMAGING COREP30MH062512 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI DAVID J MOORE · 2001 to 2026
$50.4M
Transgenic & Knock-out MouseP30DK063491 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ALAN R. SALTIEL · 2003 to 2026
$40.4M
HOPE - HIV Obstruction by Programmed EpigeneticsUM1AI164559 · NIAID · J. DAVID GLADSTONE INSTITUTES · PI Lishomwa C Ndhlovu, Melanie Maria Ott · 2021 to 2026
$32.2M
The Manhattan HIV Brain BankU24MH100931 · NIMH · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI MORGELLO, SUSAN · 2013 to 2023
$14.0M
California NeuroAIDS Tissue NetworkU24MH100928 · NIMH · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI ACHIM, CRISTIAN L, MOORE, DAVID J · 2013 to 2023
$13.9M
NATIONAL NEUROLOGICAL AIDS BANKU24MH100929 · NIMH · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI SINGER, ELYSE J · 2013 to 2023
$12.5M
Texas NeuroAIDS Research CenterU24MH100930 · NIMH · UNIVERSITY OF TEXAS MED BR GALVESTON · PI GELMAN, BENJAMIN B. · 2013 to 2023
$12.1M
San Diego Digestive Diseases Research CenterP30DK120515 · NIDDK · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI LARS ECKMANN, Bernd G. Schnabl · 2019 to 2026
$10.8M
NNTC Data Coordinating CenterU24MH100925 · NIMH · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI FOX, HOWARD S, SHERMAN, SETH · 2013 to 2022
$9.5M
NCATS NIH HHS UL1 TR001442NCI NIH HHS P30 CA023100NIAID NIH HHS P30 AI036214NIAID NIH HHS R01 AI147821NIAID NIH HHS R21 AI134295NIAID NIH HHS UM1 AI164559NIAMS NIH HHS T32 AR064194NIA NIH HHS R01 AG061066NICHD NIH HHS R21 HD094646NIDA NIH HHS DP2 DA051915NIDDK NIH HHS P30 DK063491NIDDK NIH HHS P30 DK120515NIMH NIH HHS P30 MH062512NIMH NIH HHS R25 MH081482NIMH NIH HHS U24 MH100925NIMH NIH HHS U24 MH100928NIMH NIH HHS U24 MH100929NIMH NIH HHS U24 MH100930NIMH NIH HHS U24 MH100931
6 · The paper itself

Abstract

HIV reservoirs persist in anatomic compartments despite antiretroviral therapy (ART). Characterizing archival HIV DNA in the central nervous system (CNS) and other tissues is crucial to inform cure strategies. We evaluated paired autopsy brain-frontal cortex (FC), occipital cortex (OCC), and basal ganglia (BG)-and peripheral lymphoid tissues from 63 people with HIV. Participants passed away while virally suppressed on ART at the last visit and without evidence of CNS opportunistic disease. We quantified total HIV DNA in all participants and obtained full-length HIV-envelope (FL HIV-

Indexed as

BrainDNA, ViralHIV-1Lymphoid Tissueenv Gene Products, Human Immunodeficiency VirusFemaleHIV InfectionsHumansMaleMiddle AgedProvirusesSpleenDNA, Viralenv Gene Products, Human Immunodeficiency Virusarchival HIVbrainCNSlymphoid tissuesequencingsex differences

Identifiers

PMID37184401
PMCPMC10308944
OpenAlexW4376617640

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.