Evidence map›Paper›PMID 37200372›Full record

ArticlePLoS genetics2023

Comprehensive mutational analysis of the checkpoint signaling function of Rpa1/Ssb1 in fission yeast.

Yong-Jie Xu, Sankhadip Bhadra, Alaa Taha A Mahdi, Kamal Dev, Ilknur Yurtsever, Toru M Nakamura

Open access · goldAbstract read
In one paragraph

Article in PLoS genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.3field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 2 citations in OpenAlex.

  1. Article
  2. Fission yeast RPA-TERT-Tpz1bioRxiv : the preprint server for biology · 2026
    Article
  3. Article
  4. Article
  5. Article
  6. Article
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Yong-Jie XuDepartment of Pharmacology and Toxicology, Boonshoft School of Medicine, Wright State University, Dayton, Ohio, United States of America.ORCID 0000-0002-5091-5247
Sankhadip BhadraDepartment of Pharmacology and Toxicology, Boonshoft School of Medicine, Wright State University, Dayton, Ohio, United States of America.
Alaa Taha A MahdiDepartment of Pharmacology and Toxicology, Boonshoft School of Medicine, Wright State University, Dayton, Ohio, United States of America.
Kamal DevDepartment of Pharmacology and Toxicology, Boonshoft School of Medicine, Wright State University, Dayton, Ohio, United States of America.
Ilknur YurtseverDepartment of Pharmacology and Toxicology, Boonshoft School of Medicine, Wright State University, Dayton, Ohio, United States of America.ORCID 0000-0001-7944-5077
Toru M NakamuraDepartment of Biochemistry and Molecular Genetics, University of Illinois at Chicago, Chicago, Illinois, United States of America.ORCID 0000-0001-5752-0814
Wright State University · USUniversity of Illinois Chicago · US

Funding

DNA Replication Checkpoint in Fission YeastR35GM144307 · NIGMS · WRIGHT STATE UNIVERSITY · PI Yongjie Xu · 2022 to 2026
$1.9M
Regulation of Telomere Maintenance in Fission YeastR01GM143316 · NIGMS · UNIVERSITY OF ILLINOIS AT CHICAGO · PI NAKAMURA, TORU · 2022 to 2025
$1.6M
NIGMS NIH HHS R01 GM143316NIGMS NIH HHS R35 GM144307
6 · The paper itself

Abstract

Replication protein A (RPA) is a heterotrimeric complex and the major single-strand DNA (ssDNA) binding protein in eukaryotes. It plays important roles in DNA replication, repair, recombination, telomere maintenance, and checkpoint signaling. Because RPA is essential for cell survival, understanding its checkpoint signaling function in cells has been challenging. Several RPA mutants have been reported previously in fission yeast. None of them, however, has a defined checkpoint defect. A separation-of-function mutant of RPA, if identified, would provide significant insights into the checkpoint initiation mechanisms. We have explored this possibility and carried out an extensive genetic screen for Rpa1/Ssb1, the large subunit of RPA in fission yeast, looking for mutants with defects in checkpoint signaling. This screen has identified twenty-five primary mutants that are sensitive to genotoxins. Among these mutants, two have been confirmed partially defective in checkpoint signaling primarily at the replication fork, not the DNA damage site. The remaining mutants are likely defective in other functions such as DNA repair or telomere maintenance. Our screened mutants, therefore, provide a valuable tool for future dissection of the multiple functions of RPA in fission yeast.

Indexed as

SchizosaccharomycesDNA-Binding ProteinsDNA DamageDNA RepairDNA ReplicationDNA, Single-StrandedReplication Protein ADNA-Binding ProteinsDNA, Single-StrandedReplication Protein A

Identifiers

PMID37200372
PMCPMC10231789
OpenAlexW4377047565

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.