Evidence map›Paper›PMID 37216008›Full record

ArticleHGG advances2023

A complex structural variant near

Elke de Boer, Carlo Marcelis, Kornelia Neveling, Ellen van Beusekom, Alexander Hoischen, Willemijn M Klein, Nicole de Leeuw, Tuomo Mantere, Uirá S Melo, Jeroen van Reeuwijk and 5 more

Open access · goldAbstract read
In one paragraph

Article in HGG advances, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 2 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 3 countries.

Elke de BoerDepartment of Human Genetics, Radboudumc University Medical Center, Nijmegen, the Netherlands.
Carlo MarcelisDepartment of Human Genetics, Radboudumc University Medical Center, Nijmegen, the Netherlands.
Kornelia NevelingDepartment of Human Genetics, Radboudumc University Medical Center, Nijmegen, the Netherlands.
Ellen van BeusekomDepartment of Human Genetics, Radboudumc University Medical Center, Nijmegen, the Netherlands.
Alexander HoischenDepartment of Human Genetics, Radboudumc University Medical Center, Nijmegen, the Netherlands.
Willemijn M KleinDepartment of Medical Imaging, Radiology, Radboud University Medical Center, Nijmegen, the Netherlands.
Nicole de LeeuwDepartment of Human Genetics, Radboudumc University Medical Center, Nijmegen, the Netherlands.
Tuomo MantereDepartment of Human Genetics, Radboudumc University Medical Center, Nijmegen, the Netherlands.
Uirá S MeloMax Planck Institute for Molecular Genetics, RG Development & Disease, Berlin, Germany.
Jeroen van ReeuwijkDepartment of Human Genetics, Radboudumc University Medical Center, Nijmegen, the Netherlands.
Dominique SmeetsDepartment of Human Genetics, Radboudumc University Medical Center, Nijmegen, the Netherlands.
Malte SpielmannMax Planck Institute for Molecular Genetics, RG Development & Disease, Berlin, Germany.
Tjitske KleefstraDepartment of Human Genetics, Radboudumc University Medical Center, Nijmegen, the Netherlands.
Hans van BokhovenDepartment of Human Genetics, Radboudumc University Medical Center, Nijmegen, the Netherlands.
Lisenka E L M VissersDepartment of Human Genetics, Radboudumc University Medical Center, Nijmegen, the Netherlands.
Radboud University Nijmegen · NLChristian-Albrechts-Universität zu Kiel · DEMax Planck Institute for Molecular Genetics · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Split-hand/foot malformation (SHFM) is a congenital limb defect most typically presenting with median clefts in hands and/or feet, that can occur in a syndromic context as well as in isolated form. SHFM is caused by failure to maintain normal apical ectodermal ridge function during limb development. Although several genes and contiguous gene syndromes are implicated in the monogenic etiology of isolated SHFM, the disorder remains genetically unexplained for many families and associated genetic loci. We describe a family with isolated X-linked SHFM, for which the causative variant could be detected after a diagnostic journey of 20 years. We combined well-established approaches including microarray-based copy number variant analysis and fluorescence

Indexed as

Limb Deformities, CongenitalGenetic LociHumansIn Situ Hybridization, FluorescenceSOXB1 Transcription FactorsSOX3 protein, humanSOXB1 Transcription FactorsOptical genome mappingSHFM2SOX3Structural variationWhole genome sequencingX-linked split-hand/foot malformation

Identifiers

PMID37216008
PMCPMC10196709
OpenAlexW4366978178

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.