Evidence map›Paper›PMID 37218721›Full record

ReviewIntegrative and comparative biology2023

Trait Loss in Evolution: What Cavefish Have Taught Us about Mechanisms Underlying Eye Regression.

Itzel Sifuentes-Romero, Ari M Aviles, Joseph L Carter, Allen Chan-Pong, Anik Clarke, Patrick Crotty, David Engstrom, Pranav Meka, Alexandra Perez, Riley Perez and 5 more

Open access · greenAbstract readReview
In one paragraph

Review in Integrative and comparative biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
15.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Genomic signatures associated with the evolutionary loss of egg yolk in parasitoid wasps.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  9. Article
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  12. Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 3 institutions in 1 country.

Itzel Sifuentes-RomeroHarriet L. Wilkes Honors College, Florida Atlantic University, Jupiter FL 33458, USA.
Ari M AvilesHarriet L. Wilkes Honors College, Florida Atlantic University, Jupiter FL 33458, USA.ORCID 0000-0002-0839-8426
Joseph L CarterHarriet L. Wilkes Honors College, Florida Atlantic University, Jupiter FL 33458, USA.
Allen Chan-PongHarriet L. Wilkes Honors College, Florida Atlantic University, Jupiter FL 33458, USA.
Anik ClarkeHarriet L. Wilkes Honors College, Florida Atlantic University, Jupiter FL 33458, USA.
Patrick CrottyHarriet L. Wilkes Honors College, Florida Atlantic University, Jupiter FL 33458, USA.
David EngstromHarriet L. Wilkes Honors College, Florida Atlantic University, Jupiter FL 33458, USA.
Pranav MekaHarriet L. Wilkes Honors College, Florida Atlantic University, Jupiter FL 33458, USA.
Alexandra PerezHarriet L. Wilkes Honors College, Florida Atlantic University, Jupiter FL 33458, USA.
Riley PerezHarriet L. Wilkes Honors College, Florida Atlantic University, Jupiter FL 33458, USA.
Christine PhelanHarriet L. Wilkes Honors College, Florida Atlantic University, Jupiter FL 33458, USA.
Taylor SharrardHarriet L. Wilkes Honors College, Florida Atlantic University, Jupiter FL 33458, USA.
Maria I SmirnovaHarriet L. Wilkes Honors College, Florida Atlantic University, Jupiter FL 33458, USA.
Amanda J WadeHarriet L. Wilkes Honors College, Florida Atlantic University, Jupiter FL 33458, USA.
Johanna E KowalkoHarriet L. Wilkes Honors College, Florida Atlantic University, Jupiter FL 33458, USA.ORCID 0000-0002-3286-2954
Florida Atlantic University · USIowa State University · USLehigh University · US

Funding

Evolutionary approaches to identify genetic architecture regulating aggressionR35GM138345 · NIGMS · LEHIGH UNIVERSITY · PI KOWALKO, JOHANNA E. · 2020 to 2024
$2.0M
IMSD at Texas A&M University: Initiative for Maximizing Student Diversity in Biomedical SciencesT32GM135748 · NIGMS · TEXAS A&M UNIVERSITY · PI BRINKMEYER-LANGFORD, CANDICE L., CHIU, WEIHSUEH A · 2020 to 2024
$1.2M
The relationship between eye morphogenesis and brain developmentR15HD099022 · NICHD · LEHIGH UNIVERSITY · PI KOWALKO, JOHANNA E. · 2020 to 2020
$463k
NICHD NIH HHS R15 HD099022NIGMS NIH HHS R35 GM138345NIGMS NIH HHS T32 GM135748
6 · The paper itself

Abstract

Reduction or complete loss of traits is a common occurrence throughout evolutionary history. In spite of this, numerous questions remain about why and how trait loss has occurred. Cave animals are an excellent system in which these questions can be answered, as multiple traits, including eyes and pigmentation, have been repeatedly reduced or lost across populations of cave species. This review focuses on how the blind Mexican cavefish, Astyanax mexicanus, has been used as a model system for examining the developmental, genetic, and evolutionary mechanisms that underlie eye regression in cave animals. We focus on multiple aspects of how eye regression evolved in A. mexicanus, including the developmental and genetic pathways that contribute to eye regression, the effects of the evolution of eye regression on other traits that have also evolved in A. mexicanus, and the evolutionary forces contributing to eye regression. We also discuss what is known about the repeated evolution of eye regression, both across populations of A. mexicanus cavefish and across cave animals more generally. Finally, we offer perspectives on how cavefish can be used in the future to further elucidate mechanisms underlying trait loss using tools and resources that have recently become available.

Indexed as

Biological EvolutionCharacidaeAnimalsCavesEyePigmentation

Identifiers

PMID37218721
PMCPMC10445413
OpenAlexW4377564962

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.