Evidence map›Paper›PMID 37230995›Full record

ArticleNature communications2023

Decoding protein methylation function with thermal stability analysis.

Cristina Sayago, Jana Sánchez-Wandelmer, Fernando García, Begoña Hurtado, Vanesa Lafarga, Patricia Prieto, Eduardo Zarzuela, Pilar Ximénez-Embún, Sagrario Ortega, Diego Megías and 3 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 11 citations in OpenAlex.

  1. Review
  2. Review
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  4. LC-MS profiling ofbioRxiv : the preprint server for biology · 2026
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 1 country.

Cristina SayagoProteomics Unit, Spanish National Cancer Research Centre (CNIO), 28029, Madrid, Spain.
Jana Sánchez-WandelmerProteomics Unit, Spanish National Cancer Research Centre (CNIO), 28029, Madrid, Spain.
Fernando GarcíaProteomics Unit, Spanish National Cancer Research Centre (CNIO), 28029, Madrid, Spain.ORCID 0000-0003-3888-4326
Begoña HurtadoCell Division and Cancer Group, Spanish National Cancer Research Centre (CNIO), 28029, Madrid, Spain.ORCID 0000-0002-8232-3238
Vanesa LafargaGenomic Instability Group, Spanish National Cancer Research Centre (CNIO), 28029, Madrid, Spain.
Patricia PrietoMouse Genome Editing Unit, Spanish National Cancer Research Centre (CNIO), 28029, Madrid, Spain.
Eduardo ZarzuelaProteomics Unit, Spanish National Cancer Research Centre (CNIO), 28029, Madrid, Spain.
Pilar Ximénez-EmbúnProteomics Unit, Spanish National Cancer Research Centre (CNIO), 28029, Madrid, Spain.ORCID 0000-0002-2582-9443
Sagrario OrtegaMouse Genome Editing Unit, Spanish National Cancer Research Centre (CNIO), 28029, Madrid, Spain.
Diego MegíasConfocal Microscopy Unit, Spanish National Cancer Research Centre (CNIO), 28029, Madrid, Spain.
Oscar Fernández-CapetilloGenomic Instability Group, Spanish National Cancer Research Centre (CNIO), 28029, Madrid, Spain.
Marcos MalumbresCell Division and Cancer Group, Spanish National Cancer Research Centre (CNIO), 28029, Madrid, Spain.ORCID 0000-0002-0829-6315
Javier MunozProteomics Unit, Spanish National Cancer Research Centre (CNIO), 28029, Madrid, Spain. javier.munozperalta@osakidetza.eus.ORCID 0000-0003-3288-3496
Spanish National Cancer Research Centre · ESIkerbasque · ESInstitució Catalana de Recerca i Estudis Avançats · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Protein methylation is an important modification beyond epigenetics. However, systems analyses of protein methylation lag behind compared to other modifications. Recently, thermal stability analyses have been developed which provide a proxy of a protein functional status. Here, we show that molecular and functional events closely linked to protein methylation can be revealed by the analysis of thermal stability. Using mouse embryonic stem cells as a model, we show that Prmt5 regulates mRNA binding proteins that are enriched in intrinsically disordered regions and involved in liquid-liquid phase separation mechanisms, including the formation of stress granules. Moreover, we reveal a non-canonical function of Ezh2 in mitotic chromosomes and the perichromosomal layer, and identify Mki67 as a putative Ezh2 substrate. Our approach provides an opportunity to systematically explore protein methylation function and represents a rich resource for understanding its role in pluripotency.

Indexed as

HistonesProtein Processing, Post-TranslationalAnimalsEpigenesis, GeneticMethylationMiceMouse Embryonic Stem CellsHistones

Identifiers

PMID37230995
PMCPMC10212966
OpenAlexW4378217834

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.