Evidence map›Paper›PMID 37265706›Full record

ArticleFrontiers in endocrinology2023

Bioinformatic analysis reveals potential relationship between chondrocyte senescence and protein glycosylation in osteoarthritis pathogenesis.

Makoto Yoshimoto, Koki Sadamori, Kazuya Tokumura, Yuki Tanaka, Kazuya Fukasawa, Eiichi Hinoi

Open access · goldAbstract read
In one paragraph

Article in Frontiers in endocrinology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Makoto YoshimotoDepartment of Bioactive Molecules, Pharmacology, Gifu Pharmaceutical University, Gifu, Japan.
Koki SadamoriDepartment of Bioactive Molecules, Pharmacology, Gifu Pharmaceutical University, Gifu, Japan.
Kazuya TokumuraDepartment of Bioactive Molecules, Pharmacology, Gifu Pharmaceutical University, Gifu, Japan.
Yuki TanakaDepartment of Bioactive Molecules, Pharmacology, Gifu Pharmaceutical University, Gifu, Japan.
Kazuya FukasawaDepartment of Bioactive Molecules, Pharmacology, Gifu Pharmaceutical University, Gifu, Japan.
Eiichi HinoiDepartment of Bioactive Molecules, Pharmacology, Gifu Pharmaceutical University, Gifu, Japan.
Gifu Pharmaceutical University · JPGifu University · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Osteoarthritis (OA) is the most common degenerative and progressive joint disease. Cellular senescence is an irreversible cell cycle arrest progressive with age, while protein glycosylation is the most abundant post-translational modification, regulating various cellular and biological pathways. The implication of either chondrocyte senescence or protein glycosylation in the OA pathogenesis has been extensively and individually studied. In this study, we aimed to investigate the possible relationship between chondrocyte senescence and protein glycosylation on the pathogenesis of OA using single-cell RNA sequencing datasets of clinical OA specimens deposited in the Gene Expression Omnibus database with a different cohort. We demonstrated that both cellular senescence signal and protein glycosylation pathways in chondrocytes are validly associated with OA pathogenesis. In addition, the cellular senescence signal is well-connected to the O-linked glycosylation pathway in OA chondrocyte and vice-versa. The expression levels of the polypeptide N-acetylgalactosaminyltransferase (GALNT) family, which is essential for the biosynthesis of O-Glycans at the early stage, are highly upregulated in OA chondrocytes. Moreover, the expression levels of the GALNT family are prominently associated with chondrocyte senescence as well as pathological features of OA. Collectively, these findings uncover a crucial relationship between chondrocyte senescence and O-linked glycosylation on the OA pathophysiology, thereby revealing a potential target for OA.

Indexed as

ChondrocytesOsteoarthritisCellular SenescenceGlycosylationHumansProtein Processing, Post-Translationalcellular senescencechondrocytegene expression omnibusosteoarthritisprotein glycosylation

Identifiers

PMID37265706
PMCPMC10229820
OpenAlexW4377042654

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.