Evidence map›Paper›PMID 37290497›Full record

ArticleDevelopmental biology2023

Insulin-like growth factor receptor / mTOR signaling elevates global translation to accelerate zebrafish fin regenerative outgrowth.

Victor M Lewis, Heather K Le Bleu, Astra L Henner, Hannah Markovic, Amy E Robbins, Scott Stewart, Kryn Stankunas

Open access · greenAbstract read
In one paragraph

Article in Developmental biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.9field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Intracellular pH dynamics promotes zebrafish larval tail regeneration.bioRxiv : the preprint server for biology · 2026
    Article
  2. Article
  3. Sonic hedgehog signaling promotes basal epidermalbioRxiv : the preprint server for biology · 2025
    Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Victor M LewisInstitute of Molecular Biology, University of Oregon, 273 Onyx Bridge, 1318 Franklin Blvd, Eugene, OR, 97403-1229, USA.
Heather K Le BleuInstitute of Molecular Biology, University of Oregon, 273 Onyx Bridge, 1318 Franklin Blvd, Eugene, OR, 97403-1229, USA; Department of Biology, University of Oregon, 273 Onyx Bridge, 1318 Franklin Blvd, Eugene, OR, 97403-1229, USA.
Astra L HennerInstitute of Molecular Biology, University of Oregon, 273 Onyx Bridge, 1318 Franklin Blvd, Eugene, OR, 97403-1229, USA.
Hannah MarkovicInstitute of Molecular Biology, University of Oregon, 273 Onyx Bridge, 1318 Franklin Blvd, Eugene, OR, 97403-1229, USA; Department of Biology, University of Oregon, 273 Onyx Bridge, 1318 Franklin Blvd, Eugene, OR, 97403-1229, USA.
Amy E RobbinsInstitute of Molecular Biology, University of Oregon, 273 Onyx Bridge, 1318 Franklin Blvd, Eugene, OR, 97403-1229, USA; Department of Biology, University of Oregon, 273 Onyx Bridge, 1318 Franklin Blvd, Eugene, OR, 97403-1229, USA.
Scott StewartInstitute of Molecular Biology, University of Oregon, 273 Onyx Bridge, 1318 Franklin Blvd, Eugene, OR, 97403-1229, USA.
Kryn StankunasInstitute of Molecular Biology, University of Oregon, 273 Onyx Bridge, 1318 Franklin Blvd, Eugene, OR, 97403-1229, USA; Department of Biology, University of Oregon, 273 Onyx Bridge, 1318 Franklin Blvd, Eugene, OR, 97403-1229, USA. Electronic address: kryn@uoregon.edu.
Oregon Research Institute · USUniversity of Oregon · US

Funding

Graduate Training in Genetics Administrative Supplement - Career Curriculum DevelopmentT32GM007413 · NIGMS · UNIVERSITY OF OREGON · PI GUILLEMIN, KAREN J · 1985 to 2022
$7.8M
DEVELOPMENTAL BIOLOGY TRAINING PROGRAMT32HD007348 · NICHD · UNIVERSITY OF OREGON · PI Chris Q Doe, KRYN STANKUNAS · 1989 to 2026
$6.8M
Ion signaling, cell transitions, and organ scaling during fin regenerationR01GM149999 · NIGMS · UNIVERSITY OF OREGON · PI KRYN STANKUNAS, Scott J Stewart · 2023 to 2026
$1.9M
Transpositional scaling and niche transitions restore organ size and shape during zebrafish fin regenerationR01GM127761 · NIGMS · UNIVERSITY OF OREGON · PI STANKUNAS, KRYN, STEWART, SCOTT J · 2018 to 2021
$1.8M
Identifying mechanisms of coordinated outgrowth during zebrafish fin regenerationF32GM140712 · NIGMS · UNIVERSITY OF OREGON · PI LEWIS, VICTOR MAXWELL · 2021 to 2022
$136k
Ion signaling and cell state transitions for organ size control of regenerating zebrafish finsF31HD103459 · NICHD · UNIVERSITY OF OREGON · PI LE BLEU, HEATHER K · 2021 to 2023
$135k
Mechanisms of Sonic hedgehog mediated skeletal patterning in zebrafish fin appendagesF31GM139343 · NIGMS · UNIVERSITY OF OREGON · PI ROBBINS, AMY ELIZABETH · 2020 to 2022
$106k
NICHD NIH HHS F31 HD103459NICHD NIH HHS T32 HD007348NIGMS NIH HHS F31 GM139343NIGMS NIH HHS F32 GM140712NIGMS NIH HHS R01 GM127761NIGMS NIH HHS R01 GM149999NIGMS NIH HHS T32 GM007413
6 · The paper itself

Abstract

Zebrafish robustly regenerate fins, including their characteristic bony ray skeleton. Amputation activates intra-ray fibroblasts and dedifferentiates osteoblasts that migrate under a wound epidermis to establish an organized blastema. Coordinated proliferation and re-differentiation across lineages then sustains progressive outgrowth. We generate a single cell transcriptome dataset to characterize regenerative outgrowth and explore coordinated cell behaviors. We computationally identify sub-clusters representing most regenerative fin cell lineages, and define markers of osteoblasts, intra- and inter-ray fibroblasts and growth-promoting distal blastema cells. A pseudotemporal trajectory and in vivo photoconvertible lineage tracing indicate distal blastemal mesenchyme restores both intra- and inter-ray fibroblasts. Gene expression profiles across this trajectory suggest elevated protein production in the blastemal mesenchyme state. O-propargyl-puromycin incorporation and small molecule inhibition identify insulin growth factor receptor (IGFR)/mechanistic target of rapamycin kinase (mTOR)-dependent elevated bulk translation in blastemal mesenchyme and differentiating osteoblasts. We test candidate cooperating differentiation factors identified from the osteoblast trajectory, finding IGFR/mTOR signaling expedites glucocorticoid-promoted osteoblast differentiation in vitro. Concordantly, mTOR inhibition slows but does not prevent fin regenerative outgrowth in vivo. IGFR/mTOR may elevate translation in both fibroblast- and osteoblast-lineage cells during the outgrowth phase as a tempo-coordinating rheostat.

Indexed as

Signal TransductionZebrafishAnimal FinsAnimalsCell DifferentiationReceptors, SomatomedinTOR Serine-Threonine KinasesZebrafish ProteinsReceptors, SomatomedinTOR Serine-Threonine KinasesZebrafish Proteins

Identifiers

PMID37290497
PMCPMC10866574
OpenAlexW4379740308

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.