Evidence map›Paper›PMID 37307624›Full record

ArticleEuropean journal of medicinal chemistry2023

Elucidation of novel TRAP1-Selective inhibitors that regulate mitochondrial processes.

Taylor Merfeld, Shuxia Peng, Bradley M Keegan, Vincent M Crowley, Christopher M Brackett, Andrew Gutierrez, Nathan R McCann, Tyelor S Reynolds, Matthew C Rhodes, Katherine M Byrd and 3 more

Abstract read
In one paragraph

Article in European journal of medicinal chemistry, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
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  3. Review
  4. Article
  5. Article
  6. Article
  7. Review
  8. Article
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  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Taylor MerfeldDepartment of Chemistry and Biochemistry, Warren Family Research Center for Drug Discovery and Development, University of Notre Dame, Notre Dame, IN, 46556, USA.
Shuxia PengDepartment of Biochemistry & Molecular Biology, Oklahoma State University, NRC 246 Oklahoma State University, Stillwater, OK, 74078, USA.
Bradley M KeeganDepartment of Chemistry and Biochemistry, Warren Family Research Center for Drug Discovery and Development, University of Notre Dame, Notre Dame, IN, 46556, USA.
Vincent M CrowleyDepartment of Chemistry and Biochemistry, Warren Family Research Center for Drug Discovery and Development, University of Notre Dame, Notre Dame, IN, 46556, USA.
Christopher M BrackettDepartment of Chemistry and Biochemistry, Warren Family Research Center for Drug Discovery and Development, University of Notre Dame, Notre Dame, IN, 46556, USA.
Andrew GutierrezDepartment of Chemistry and Biochemistry, Warren Family Research Center for Drug Discovery and Development, University of Notre Dame, Notre Dame, IN, 46556, USA.
Nathan R McCannDepartment of Chemistry and Biochemistry, Warren Family Research Center for Drug Discovery and Development, University of Notre Dame, Notre Dame, IN, 46556, USA.
Tyelor S ReynoldsDepartment of Chemistry and Biochemistry, Warren Family Research Center for Drug Discovery and Development, University of Notre Dame, Notre Dame, IN, 46556, USA.
Matthew C RhodesDepartment of Chemistry and Biochemistry, Warren Family Research Center for Drug Discovery and Development, University of Notre Dame, Notre Dame, IN, 46556, USA.
Katherine M ByrdDepartment of Chemistry and Biochemistry, Warren Family Research Center for Drug Discovery and Development, University of Notre Dame, Notre Dame, IN, 46556, USA.
Junpeng DengDepartment of Biochemistry & Molecular Biology, Oklahoma State University, NRC 246 Oklahoma State University, Stillwater, OK, 74078, USA.
Robert L MattsDepartment of Biochemistry & Molecular Biology, Oklahoma State University, NRC 246 Oklahoma State University, Stillwater, OK, 74078, USA.
Brian S J BlaggDepartment of Chemistry and Biochemistry, Warren Family Research Center for Drug Discovery and Development, University of Notre Dame, Notre Dame, IN, 46556, USA. Electronic address: bblagg@nd.edu.

Funding

Structure-Function Studies of MsvR, a Methanogen-Specific Transcriptional RegulaP20GM103640 · NIGMS · UNIVERSITY OF OKLAHOMA · PI THOMAS, LEONARD M · 2012 to 2021
$20.4M
Chemistry-Biochemistry-Biology Training Program at Notre DameT32GM075762 · NIGMS · UNIVERSITY OF NOTRE DAME · PI CHANG, MAYLAND F, MOBASHERY, SHAHRIAR · 2007 to 2021
$3.7M
Development of Hsp90 inhibitors for the treatment of cancerR01CA167079 · NCI · UNIVERSITY OF NOTRE DAME · PI BLAGG, BRIAN S J · 2012 to 2016
$1.5M
Structure/Function Studies of Anti-cancer Hsp90 Inhibitors that Target the C-terminal DomainR15CA219907 · NCI · OKLAHOMA STATE UNIVERSITY STILLWATER · PI DENG, JUNPENG, HARTSON, STEVEN D · 2017 to 2017
$438k
NCI NIH HHS R01 CA167079NCI NIH HHS R15 CA219907NIGMS NIH HHS P20 GM103640NIGMS NIH HHS T32 GM075762
6 · The paper itself

Abstract

Hsp90 isoform-selective inhibitors represent a new paradigm for novel anti-cancer drugs as each of the four isoforms have specific cellular localization, function, and client proteins. The mitochondrial isoform, TRAP1, is the least understood member of the Hsp90 family due to the lack of small molecule tools to study its biological function. Herein, we report novel TRAP1-selective inhibitors used to interrogate TRAP1's biological function along with co-crystal structures of such compounds bound to the N-terminus of TRAP1. Solution of the co-crystal structure allowed for a structure-based approach that resulted in compound 36, which is a 40 nM inhibitor with >250-fold TRAP1 selectivity over Grp94, the isoform with the highest structural similarity to TRAP1 within the N-terminal ATP binding site. Lead compounds 35 and 36 were found to selectively induce TRAP1 client protein degradation without inducing the heat shock response or disrupting Hsp90-cytosolic clients. They were also shown to inhibit OXPHOS, alter cellular metabolism towards glycolysis, disrupt TRAP1 tetramer stability, and disrupt the mitochondrial membrane potential.

Indexed as

HSP90 Heat-Shock ProteinsHumansProtein BindingProtein IsoformsHSP90 Heat-Shock ProteinsProtein IsoformsTRAP1 protein, human

Identifiers

PMID37307624
PMCPMC10529355

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.