Evidence map›Paper›PMID 37308158›Full record

ArticleEmerging infectious diseases2023

Sensitivity to Neutralizing Antibodies and Resistance to Type I Interferons in SARS-CoV-2 R.1 Lineage Variants, Canada.

Rajesh Abraham Jacob, Ali Zhang, Hannah O Ajoge, Michael R D'Agostino, Kuganya Nirmalarajah, Altynay Shigayeva, Wael L Demian, Sheridan J C Baker, Hooman Derakhshani, Laura Rossi and 15 more

Open access · diamondAbstract read
In one paragraph

Article in Emerging infectious diseases, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.8field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. SARS-CoV-2 nsp15 endoribonuclease antagonizes dsRNA-induced antiviral signaling.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors.

Rajesh Abraham Jacob
Ali Zhang
Hannah O Ajoge
Michael R D'Agostino
Kuganya Nirmalarajah
Altynay Shigayeva
Wael L Demian
Sheridan J C Baker
Hooman Derakhshani
Laura Rossi
Jalees A Nasir
Emily M Panousis
Ahmed N Draia
Christie Vermeiren
Jodi Gilchrist
Nicole Smieja
David Bulir
Marek Smieja
Michael G Surette
Andrew G McArthur
Allison J McGeer
Samira Mubareka
Arinjay Banerjee
Matthew S Miller
Karen Mossman

Funding

CIHR 439999
6 · The paper itself

Abstract

Isolating and characterizing emerging SARS-CoV-2 variants is key to understanding virus pathogenesis. In this study, we isolated samples of the SARS-CoV-2 R.1 lineage, categorized as a variant under monitoring by the World Health Organization, and evaluated their sensitivity to neutralizing antibodies and type I interferons. We used convalescent serum samples from persons in Canada infected either with ancestral virus (wave 1) or the B.1.1.7 (Alpha) variant of concern (wave 3) for testing neutralization sensitivity. The R.1 isolates were potently neutralized by both the wave 1 and wave 3 convalescent serum samples, unlike the B.1.351 (Beta) variant of concern. Of note, the R.1 variant was significantly more resistant to type I interferons (IFN-α/β) than was the ancestral isolate. Our study demonstrates that the R.1 variant retained sensitivity to neutralizing antibodies but evolved resistance to type I interferons. This critical driving force will influence the trajectory of the pandemic.

Indexed as

COVID-19Interferon Type IAntibodies, NeutralizingAntibodies, ViralCanadaCOVID-19 SerotherapyHumansSARS-CoV-2Spike Glycoprotein, CoronavirusAntibodies, NeutralizingAntibodies, ViralInterferon Type ISpike Glycoprotein, Coronavirusspike protein, SARS-CoV-2Canadacoronavirus diseaseCOVID-19N501Y spikeneutralizing antibodiesrespiratory infectionsSARS-CoV-2severe acute respiratory syndrome coronavirus 2type I interferonsvariants of concernvariant under monitoringvirusesVoCVuMzoonoses

Identifiers

PMID37308158
PMCPMC10310370
OpenAlexW4380422238

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.