Evidence map›Paper›PMID 37336883›Full record

ArticleNature communications2023

Structural insights into regulation of the PEAK3 pseudokinase scaffold by 14-3-3.

Hayarpi Torosyan, Michael D Paul, Antoine Forget, Megan Lo, Devan Diwanji, Krzysztof Pawłowski, Nevan J Krogan, Natalia Jura, Kliment A Verba

Abstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Hayarpi Torosyan *Cardiovascular Research Institute, University of California San Francisco, San Francisco, CA, 94158, USA.ORCID 0000-0003-1576-0195
Michael D Paul *Cardiovascular Research Institute, University of California San Francisco, San Francisco, CA, 94158, USA.ORCID 0000-0001-8479-110X
Antoine ForgetQuantitative Biosciences Institute (QBI), University of California San Francisco, San Francisco, CA, 94158, USA.
Megan LoCardiovascular Research Institute, University of California San Francisco, San Francisco, CA, 94158, USA.
Devan DiwanjiCardiovascular Research Institute, University of California San Francisco, San Francisco, CA, 94158, USA.
Krzysztof PawłowskiDepartment of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, TX, 75390, USA.
Nevan J KroganQuantitative Biosciences Institute (QBI), University of California San Francisco, San Francisco, CA, 94158, USA.ORCID 0000-0003-4902-337X
Natalia JuraCardiovascular Research Institute, University of California San Francisco, San Francisco, CA, 94158, USA. natalia.jura@ucsf.edu.ORCID 0000-0001-5129-641X
Kliment A VerbaQuantitative Biosciences Institute (QBI), University of California San Francisco, San Francisco, CA, 94158, USA. kliment.verba@ucsf.edu.ORCID 0000-0002-2238-8590

Funding

Using Networks to Seed Hierarchical Whole-cell Models of CancerU54CA209891 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI IDEKER, TREY · 2017 to 2021
$10.9M
STRUCTURAL BIOLOGY TRAINING PROGRAMT32GM008284 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI KORTEMME, TANJA · 1988 to 2022
$10.1M
Structural and Functional Studies of HER ReceptorsR35GM139636 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Natalia Jura · 2021 to 2026
$2.5M
NCI NIH HHS U54 CA209891NIGMS NIH HHS R35 GM139636NIGMS NIH HHS T32 GM008284
6 · The paper itself

Abstract

PEAK pseudokinases are molecular scaffolds which dimerize to regulate cell migration, morphology, and proliferation, as well as cancer progression. The mechanistic role dimerization plays in PEAK scaffolding remains unclear, as there are no structures of PEAKs in complex with their interactors. Here, we report the cryo-EM structure of dimeric PEAK3 in complex with an endogenous 14-3-3 heterodimer. Our structure reveals an asymmetric binding mode between PEAK3 and 14-3-3 stabilized by one pseudokinase domain and the SHED domain of the PEAK3 dimer. The binding interface contains a canonical phosphosite-dependent primary interaction and a unique secondary interaction not observed in previous structures of 14-3-3/client complexes. Additionally, we show that PKD regulates PEAK3/14-3-3 binding, which when prevented leads to PEAK3 nuclear enrichment and distinct protein-protein interactions. Altogether, our data demonstrate that PEAK3 dimerization forms an unusual secondary interface for 14-3-3 binding, facilitating 14-3-3 regulation of PEAK3 localization and interactome diversity.

Indexed as

14-3-3 ProteinsCytoskeletal ProteinsProtein Multimerization14-3-3 ProteinsCytoskeletal Proteins

Identifiers

PMID37336883
PMCPMC10279700

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.