Evidence map›Paper›PMID 37337149›Full record

ArticleBMC nephrology2023

Regulon analysis identifies protective FXR and CREB5 in proximal tubules in early diabetic kidney disease.

Wanting Shi, Weibo Le, Qiaoli Tang, Shaolin Shi, Jingsong Shi

Open access · goldAbstract read
In one paragraph

Article in BMC nephrology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Diagnostic Roles of circXPNPEP3 as Biomarker for Diabetic Nephropathy.Diabetes, metabolic syndrome and obesity : targets and therapy · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Wanting Shi *National Clinical Research Center for Kidney Disease, Affiliated Jinling Hospital, Medical School, Nanjing University, Nanjing, China.
Weibo Le *National Clinical Research Center for Kidney Disease, Affiliated Jinling Hospital, Medical School, Nanjing University, Nanjing, China.
Qiaoli TangNational Clinical Research Center for Kidney Disease, Affiliated Jinling Hospital, Medical School, Nanjing University, Nanjing, China.
Shaolin ShiNational Clinical Research Center for Kidney Disease, Affiliated Jinling Hospital, Medical School, Nanjing University, Nanjing, China. shaolin.shi@nju.edu.cn.
Jingsong ShiNational Clinical Research Center for Kidney Disease, Affiliated Jinling Hospital, Medical School, Nanjing University, Nanjing, China. shijs1982@hotmail.com.
Nanjing General Hospital of Nanjing Military Command · CNNanjing University · CNUniversity of Science and Technology of China · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Diabetic kidney disease (DKD) is the most common complication of diabetes mellitus and a leading cause of kidney failure worldwide. Despite its prevalence, the mechanisms underlying early kidney damage in DKD remain poorly understood. In this study, we used single nucleus RNA-seq to construct gene regulatory networks (GRNs) in the kidney cortex of patients with early DKD. By comparing these networks with those of healthy controls, we identify cell type-specific changes in genetic regulation associated with diabetic status. The regulon activities of FXR (NR1H4) and CREB5 were found to be upregulated in kidney proximal convoluted tubule epithelial cells (PCTs), which were validated using immunofluorescence staining in kidney biopsies from DKD patients. In vitro experiments using cultured HK2 cells showed that FXR and CREB5 protected cells from apoptosis and epithelial-mesenchymal transition. Our findings suggest that FXR and CREB5 may be promising targets for early intervention in patients with DKD.

Indexed as

Cyclic AMP Response Element-Binding Protein ADiabetes MellitusDiabetic NephropathiesReceptors, Cytoplasmic and NuclearGene Expression RegulationHumansKidneyKidney Tubules, ProximalReceptor, Farnesoid X-ActivatedRegulonCREB5 protein, humanCyclic AMP Response Element-Binding Protein AReceptor, Farnesoid X-ActivatedReceptors, Cytoplasmic and NuclearCREB5Diabetic kidney diseaseFXRGene regulatory networkProximal tubule epithelial cellsSingle nucleus RNA-seq

Identifiers

PMID37337149
PMCPMC10278299
OpenAlexW4381164841

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.