Evidence map›Paper›PMID 37365013›Full record

Observational studyAnnals of the rheumatic diseases2023

Longitudinal gut microbiome analyses and blooms of pathogenic strains during lupus disease flares.

Doua F Azzouz, Ze Chen, Peter M Izmirly, Lea Ann Chen, Zhi Li, Chongda Zhang, David Mieles, Kate Trujillo, Adriana Heguy, Alejandro Pironti and 7 more

Open access · hybridAbstract readObservational Study
In one paragraph

Observational study in Annals of the rheumatic diseases, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 48 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
48citing papers in PubMed, 2 pooled it
13.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

48 citing papers in PubMed, 2 syntheses or guidelines pooled it, 54 citations in OpenAlex.

  1. Pooled it
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  19. Microbiota-gut-kidney axis in health and renal disease.International journal of biological sciences · 2026
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 4 institutions in 2 countries.

Doua F AzzouzMedicine, NYU Grossman School of Medicine, New York, New York, USA.
Ze ChenVilcek Institute of Graduate Biomedical Sciences, NYU Grossman School of Medicine, New York, New York, USA.
Peter M IzmirlyMedicine, NYU Grossman School of Medicine, New York, New York, USA.ORCID 0000-0001-5445-2182
Lea Ann ChenMedicine, NYU Grossman School of Medicine, New York, New York, USA.
Zhi LiInstitute of Systems Genetics, NYU Grossman School of Medicine, New York, New York, USA.
Chongda ZhangVilcek Institute of Graduate Biomedical Sciences, NYU Grossman School of Medicine, New York, New York, USA.
David MielesMedicine, NYU Grossman School of Medicine, New York, New York, USA.
Kate TrujilloMedicine, NYU Grossman School of Medicine, New York, New York, USA.
Adriana HeguyPathology, NYU Grossman School of Medicine, New York, New York, USA.
Alejandro PirontiMicrobiology, NYU Grossman School of Medicine, New York, New York, USA.
Greg G PutzelMicrobiology, NYU Grossman School of Medicine, New York, New York, USA.
Dominik SchwudkeDivision of Bioanalytical Chemsitry, Forschungszentrum Borstel Leibniz Lungenzentrum, Borstel, Germany.ORCID 0000-0002-1379-9451
David FenyoInstitute of Systems Genetics, NYU Grossman School of Medicine, New York, New York, USA.
Jill P BuyonMedicine, NYU Grossman School of Medicine, New York, New York, USA.
Alexander V AlekseyenkoDepartment of Public Health Sciences, Biomedical Informatics Center, Program for Microbiome Research, Medical University of South Carolina, Charleston, South Carolina, USA.
Nicolas GischDivision of Bioanalytical Chemistry, Priority Area Infections, Forschungszentrum Borstel Leibniz Lungenzentrum, Borstel, Germany.ORCID 0000-0003-3260-5269
Gregg J SilvermanMedicine, NYU Grossman School of Medicine, New York, New York, USA gregg.silverman@nyumc.org.ORCID 0000-0001-9480-9457
New York University · USGerman Center for Infection Research · DEMedical University of South Carolina · USResearch Center Borstel - Leibniz Lung Center · DE

Funding

Immune Tolerance Network UM1 2023 SupplementUM1AI109565 · NIAID · BENAROYA RESEARCH INST AT VIRGINIA MASON · PI Mark S Anderson, Jane Hoyt Buckner · 2014 to 2026
$451.6M
Vaccine FacilityP30CA016087 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI MARK Reid PHILIPS · 1985 to 2026
$83.1M
Institutional Clinical and Translational Science AwardUL1TR000038 · NCATS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI CRONSTEIN, BRUCE NEIL, HOCHMAN, JUDITH S · 2012 to 2014
$16.8M
Translational Center of Molecular Profiling in Preclinical and Established Lupus (COMPEL)P50AR070591 · NIAMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI REIZIS, BORIS · 2017 to 2021
$6.7M
Protein-Glycan Interaction Resource at the National Center for Functional Glycomics (NCFG)R24GM137763 · NIGMS · BETH ISRAEL DEACONESS MEDICAL CENTER · PI RICHARD D CUMMINGS · 2020 to 2026
$5.8M
MATERNAL AUTOANTIBODIES--PATHOGENESIS OF NEONATAL LUPUSR01AR042455 · NIAMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI BUYON, JILL PAMELA · 1994 to 2007
$2.7M
Thromboinflammatory pathways triggered by gut dysbiosis in patients with LupusR21AI180737 · NIAID · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI SILVERMAN, GREGG JOSHUA · 2024 to 2025
$460k
NCATS NIH HHS UL1 TR000038NCI NIH HHS P30 CA016087NIAID NIH HHS HHSN272201400019CNIAID NIH HHS R21 AI180737NIAID NIH HHS UM1 AI109565NIAMS NIH HHS P50 AR070591NIAMS NIH HHS R01 AR042455NIGMS NIH HHS R24 GM137763
6 · The paper itself

Abstract

objectiveWhereas genetic susceptibility for systemic lupus erythematosus (SLE) has been well explored, the triggers for clinical disease flares remain elusive. To investigate relationships between microbiota community resilience and disease activity, we performed the first longitudinal analyses of lupus gut-microbiota communities.

methodsIn an observational study, taxononomic analyses, including multivariate analysis of ß-diversity, assessed time-dependent alterations in faecal communities from patients and healthy controls. From gut blooms, strains were isolated, with genomes and associated glycans analysed.

resultsMultivariate analyses documented that, unlike healthy controls, significant temporal community-wide ecological microbiota instability was common in SLE patients, and transient intestinal growth spikes of several pathogenic species were documented. Expansions of only the anaerobic commensal,

conclusionsOur findings rationalise how blooms of the RG pathobiont may be common drivers of clinical flares of often remitting-relapsing lupus disease, and highlight the potential pathogenic properties of specific strains isolated from active LN patients.

Indexed as

Gastrointestinal MicrobiomeLupus Erythematosus, SystemicLupus NephritisMicrobiotaFecesHumansSymptom Flare UpAutoantibodiesAutoimmune DiseasesImmune Complex DiseasesLupus Erythematosus, SystemicLupus Nephritis

Identifiers

PMID37365013
PMCPMC10511964
OpenAlexW4382046863

What Socratic holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.