Evidence map›Paper›PMID 37382191›Full record

ArticleAdvanced science (Weinheim, Baden-Wurttemberg, Germany)2023

LncRNA ARGI Contributes to Virus-Induced Pancreatic β Cell Inflammation Through Transcriptional Activation of IFN-Stimulated Genes.

Itziar González-Moro, Koldo Garcia-Etxebarria, Luis Manuel Mendoza, Nora Fernández-Jiménez, Jon Mentxaka, Ane Olazagoitia-Garmendia, María Nicol Arroyo, Toshiaki Sawatani, Cristina Moreno-Castro, Chiara Vinci and 4 more

Open access · goldAbstract read
In one paragraph

Article in Advanced science (Weinheim, Baden-Wurttemberg, Germany), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
2.2field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 2 countries.

Itziar González-MoroDepartment of Biochemistry and Molecular Biology, University of the Basque Country, Leioa, 48940, Spain.
Koldo Garcia-EtxebarriaBiodonostia Health Research Institute, Gastrointestinal Genetics Group, San Sebastián, 20014, Spain.
Luis Manuel MendozaDepartment of Biochemistry and Molecular Biology, University of the Basque Country, Leioa, 48940, Spain.
Nora Fernández-JiménezBiocruces Bizkaia Health Research Institute, Barakaldo, 48903, Spain.
Jon MentxakaDepartment of Biochemistry and Molecular Biology, University of the Basque Country, Leioa, 48940, Spain.
Ane Olazagoitia-GarmendiaDepartment of Biochemistry and Molecular Biology, University of the Basque Country, Leioa, 48940, Spain.
María Nicol ArroyoULB Center for Diabetes Research, Université Libre de Bruxelles, Brussels, 1070, Belgium.
Toshiaki SawataniULB Center for Diabetes Research, Université Libre de Bruxelles, Brussels, 1070, Belgium.
Cristina Moreno-CastroULB Center for Diabetes Research, Université Libre de Bruxelles, Brussels, 1070, Belgium.
Chiara VinciULB Center for Diabetes Research, Université Libre de Bruxelles, Brussels, 1070, Belgium.
Anne Op de BeekULB Center for Diabetes Research, Université Libre de Bruxelles, Brussels, 1070, Belgium.
Miriam CnopULB Center for Diabetes Research, Université Libre de Bruxelles, Brussels, 1070, Belgium.
Mariana Igoillo-EsteveULB Center for Diabetes Research, Université Libre de Bruxelles, Brussels, 1070, Belgium.
Izortze SantinDepartment of Biochemistry and Molecular Biology, University of the Basque Country, Leioa, 48940, Spain.ORCID 0000-0003-1651-6776
Université Libre de Bruxelles · BEUniversity of the Basque Country · ESBiogipuzkoa Health Research Institute · ES

Funding

European Foundation for the Study of Diabetes EFSD/JDRF/LillyProgrammeonType1DiabetesResearchMinistry of Science and Innovation, MCIN/AEI/10.13039/501100011033 PID2019-104475GA-I00
6 · The paper itself

Abstract

Type 1 diabetes (T1D) is a complex autoimmune disease that develops in genetically susceptible individuals. Most T1D-associated single nucleotide polymorphisms (SNPs) are located in non-coding regions of the human genome. Interestingly, SNPs in long non-coding RNAs (lncRNAs) may result in the disruption of their secondary structure, affecting their function, and in turn, the expression of potentially pathogenic pathways. In the present work, the function of a virus-induced T1D-associated lncRNA named ARGI (Antiviral Response Gene Inducer) is characterized. Upon a viral insult, ARGI is upregulated in the nuclei of pancreatic β cells and binds to CTCF to interact with the promoter and enhancer regions of IFNβ and interferon-stimulated genes, promoting their transcriptional activation in an allele-specific manner. The presence of the T1D risk allele in ARGI induces a change in its secondary structure. Interestingly, the T1D risk genotype induces hyperactivation of type I IFN response in pancreatic β cells, an expression signature that is present in the pancreas of T1D patients. These data shed light on the molecular mechanisms by which T1D-related SNPs in lncRNAs influence pathogenesis at the pancreatic β cell level and opens the door for the development of therapeutic strategies based on lncRNA modulation to delay or avoid pancreatic β cell inflammation in T1D.

Indexed as

Diabetes Mellitus, Type 1Insulin-Secreting CellsRNA, Long NoncodingHumansInflammationTranscriptional ActivationRNA, Long Noncodinglong non-coding RNAspancreatic β cellssingle nucleotide polymorphismtype 1 diabetesviral infections

Identifiers

PMID37382191
PMCPMC10477904
OpenAlexW4382502622

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.