Evidence map›Paper›PMID 37386295›Full record

ArticleNature biotechnology2024

Detection of phosphorylation post-translational modifications along single peptides with nanopores.

Ian C Nova, Justas Ritmejeris, Henry Brinkerhoff, Theo J R Koenig, Jens H Gundlach, Cees Dekker

Abstract read
In one paragraph

Article in Nature biotechnology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed.

  1. Article
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  8. Proteoforms as the true units of physiological function.European journal of applied physiology · 2026
    Review
  9. Article
  10. Review
  11. Article
  12. Article
  13. Nanopore-Based Detection of Protein Posttranslational Modifications.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
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  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Ian C Nova *Department of Bionanoscience, Kavli Institute of Nanoscience Delft, Delft University of Technology, Delft, the Netherlands.
Justas Ritmejeris *Department of Bionanoscience, Kavli Institute of Nanoscience Delft, Delft University of Technology, Delft, the Netherlands.
Henry Brinkerhoff *Department of Bionanoscience, Kavli Institute of Nanoscience Delft, Delft University of Technology, Delft, the Netherlands.ORCID http://orcid.org/0000-0003-2735-8048
Theo J R KoenigDepartment of Bionanoscience, Kavli Institute of Nanoscience Delft, Delft University of Technology, Delft, the Netherlands.ORCID http://orcid.org/0000-0002-6141-0455
Jens H GundlachDepartment of Physics, University of Washington, Seattle, WA, USA.
Cees DekkerDepartment of Bionanoscience, Kavli Institute of Nanoscience Delft, Delft University of Technology, Delft, the Netherlands. c.dekker@tudelft.nl.ORCID http://orcid.org/0000-0001-6273-071X

Funding

Towards Single-Molecule Protein Sequencing with NanoporesR01HG012544 · NHGRI · UNIVERSITY OF WASHINGTON · PI DEKKER, CEES, GUNDLACH, JENS · 2022 to 2024
$1.7M
NHGRI NIH HHS R01 HG012544U.S. Department of Health & Human Services | NIH | National Human Genome Research Institute (NHGRI) HG012544-01
6 · The paper itself

Abstract

Current methods to detect post-translational modifications of proteins, such as phosphate groups, cannot measure single molecules or differentiate between closely spaced phosphorylation sites. We detect post-translational modifications at the single-molecule level on immunopeptide sequences with cancer-associated phosphate variants by controllably drawing the peptide through the sensing region of a nanopore. We discriminate peptide sequences with one or two closely spaced phosphates with 95% accuracy for individual reads of single molecules.

Indexed as

NanoporesPeptidesProtein Processing, Post-TranslationalAmino Acid SequenceHumansPhosphorylationPeptides

Identifiers

PMID37386295
PMCPMC11189593

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.