Evidence map›Paper›PMID 37400149›Full record

ArticleCancer genomics & proteomics

Bioinformatics Analysis of Novel Targets for Treating Cervical Cancer by Immunotherapy Based on Immune Escape.

Ying-Hao Han, DA-Yu Ma, Seung-Jae Lee, Ying-Ying Mao, Shuai-Yang Sun, Mei-Hua Jin, Hu-Nan Sun, Taeho Kwon

Open access · diamondAbstract read
In one paragraph

Article in Cancer genomics & proteomics. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. [miR-2110 Affects the Biological Behaviors of Lung Adenocarcinoma by Regulating CDT1].Sichuan da xue xue bao. Yi xue ban = Journal of Sichuan University. Medical science edition · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Ying-Hao HanCollege of Life Science & Biotechnology, Heilongjiang Bayi Agricultural University, Daqing, P.R. China; hyhbynd@163.com.
DA-Yu MaCollege of Life Science & Biotechnology, Heilongjiang Bayi Agricultural University, Daqing, P.R. China.
Seung-Jae LeeFunctional Biomaterial Research Center, Korea Research Institute of Bioscience and Biotechnology, Jeonbuk, Republic of Korea.
Ying-Ying MaoCollege of Life Science & Biotechnology, Heilongjiang Bayi Agricultural University, Daqing, P.R. China.
Shuai-Yang SunCollege of Life Science & Biotechnology, Heilongjiang Bayi Agricultural University, Daqing, P.R. China.
Mei-Hua JinCollege of Life Science & Biotechnology, Heilongjiang Bayi Agricultural University, Daqing, P.R. China.
Hu-Nan SunCollege of Life Science & Biotechnology, Heilongjiang Bayi Agricultural University, Daqing, P.R. China.
Taeho KwonPrimate Resources Center, Korea Research Institute of Bioscience and Biotechnology (KRIBB), Jeonbuk, Republic of Korea; kwon@kribb.re.kr.
Heilongjiang Bayi Agricultural University · CNKorea University of Science and Technology · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND/

aimCervical cancer (CC) is a high-risk disease in women, and advanced CC can be difficult to treat even with surgery, radiotherapy, and chemotherapy. Hence, developing more effective treatment methods is imperative. Cancer cells undergo a renewal process to escape immune surveillance and then attack the immune system. However, the underlying mechanisms remain unclear. Currently, only one immunotherapy drug has been approved by the Food and Drug Administration for CC, thus indicating the need for and importance of identifying key targets related to immunotherapy. MATERIALS AND

methodsData on CC and normal cervical tissue samples were downloaded from the National Center for Biotechnology Information database. Transcriptome Analysis Console software was used to analyze differentially expressed genes (DEGs) in two sample groups. These DEGs were uploaded to the DAVID online analysis platform to analyze biological processes for which they were enriched. Finally, Cytoscape was used to map protein interaction and hub gene analyses.

resultsA total of 165 up-regulated and 362 down-regulated genes were identified. Among them, 13 hub genes were analyzed in a protein-protein interaction network using the Cytoscape software. The genes were screened out based on the betweenness centrality value and average degree of all nodes. The hub genes were as follows: ANXA1, APOE, AR, C1QC, CALML5, CD47, CTSZ, HSP90AA1, HSP90B1, NOD2, THY1, TLR4, and VIM. We identified the following 12 microRNAs (miRNAs) that target the hub genes: hsa-miR-2110, hsa-miR-92a-2-5p, hsa-miR-520d-5p, hsa-miR-4514, hsa-miR-4692, hsa-miR-499b-5p, hsa-miR-5011-5p, hsa-miR-6847-5p, hsa-miR-8054, hsa-miR-642a-5p, hsa-miR-940, and hsa-miR-6893-5p.

conclusionUsing bioinformatics, we identified potential miRNAs that regulated the cancer-related genes and long noncoding RNAs (lncRNAs) that regulated these miRNAs. We further elucidated the mutual regulation of mRNAs, miRNAs, and lncRNAs involved in CC occurrence and development. These findings may have major applications in the treatment of CC by immunotherapy and the development of drugs against CC.

Indexed as

MicroRNAsRNA, Long NoncodingUterine Cervical NeoplasmsComputational BiologyFemaleGene Regulatory NetworksHumansImmunotherapyMicroRNAsRNA, Long NoncodingCervical cancerdifferentially expressed genesimmune escapelong noncoding RNAmicroRNA

Identifiers

PMID37400149
PMCPMC10320560
OpenAlexW4382998715

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.