Evidence map›Paper›PMID 37405913›Full record

ArticleCell reports2023

Global and tissue-specific aging effects on murine proteomes.

Gregory R Keele, Ji-Gang Zhang, John Szpyt, Ron Korstanje, Steven P Gygi, Gary A Churchill, Devin K Schweppe

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
11.7field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 56 citations in OpenAlex.

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  8. Integrative Omics Reveal Female-Specific Benefits of p16Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Gregory R KeeleThe Jackson Laboratory, Bar Harbor, ME 04609, USA.
Ji-Gang ZhangThe Jackson Laboratory, Bar Harbor, ME 04609, USA.
John SzpytDepartment of Cell Biology, Harvard Medical School, Boston, MA 02115, USA.
Ron KorstanjeThe Jackson Laboratory, Bar Harbor, ME 04609, USA.
Steven P GygiDepartment of Cell Biology, Harvard Medical School, Boston, MA 02115, USA.
Gary A ChurchillThe Jackson Laboratory, Bar Harbor, ME 04609, USA. Electronic address: gary.churchill@jax.org.
Devin K SchweppeDepartment of Genome Sciences, University of Washington, Seattle, WA 98105, USA. Electronic address: dkschwep@uw.edu.
Jackson Laboratory · USHarvard University · USUniversity of Washington · US

Funding

Translational CoreP30AG038070 · NIA · JACKSON LABORATORY · PI Gary A Churchill · 2010 to 2026
$19.3M
New Sample Multiplexing Technologies to Identify Chemical Probes and Illuminate Ubiquitin BiologyR01GM067945 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI GYGI, STEVEN P · 2003 to 2024
$10.5M
Bayesian Modeling of Mass-Spec Proteomics Data to Advance Studies of the Genetic Regulation of ProteinsF32GM134599 · NIGMS · JACKSON LABORATORY · PI KEELE, GREGORY R · 2020 to 2021
$139k
NIA NIH HHS P30 AG038070NIGMS NIH HHS F32 GM134599NIGMS NIH HHS R01 GM067945
6 · The paper itself

Abstract

Maintenance of protein homeostasis degrades with age, contributing to aging-related decline and disease. Previous studies have primarily surveyed transcriptional aging changes. To define the effects of age directly at the protein level, we perform discovery-based proteomics in 10 tissues from 20 C57BL/6J mice, representing both sexes at adult and late midlife ages (8 and 18 months). Consistent with previous studies, age-related changes in protein abundance often have no corresponding transcriptional change. Aging results in increases in immune proteins across all tissues, consistent with a global pattern of immune infiltration with age. Our protein-centric data reveal tissue-specific aging changes with functional consequences, including altered endoplasmic reticulum and protein trafficking in the spleen. We further observe changes in the stoichiometry of protein complexes with important roles in protein homeostasis, including the CCT/TriC complex and large ribosomal subunit. These data provide a foundation for understanding how proteins contribute to systemic aging across tissues.

Indexed as

ProteomeProteostasisAgingAnimalsFemaleMaleMiceMice, Inbred C57BLProteomeB6C57BL/6JCP: GenomicsCP: Metabolismmultitissueorganismal agingprotein complexprotein homeostasisproteomicsproteostasistandem mass tagTMT

Identifiers

PMID37405913
PMCPMC10588767
OpenAlexW4383106482

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.