Evidence mapPaperPMID 37409682Full record

ArticleJournal of cellular and molecular medicine2023

Classification and characterisation of extracellular vesicles-related tuberculosis subgroups and immune cell profiles.

Peipei Zhou, Jie Shen, Xiao Ge, Fang Ding, Hong Zhang, Xinlin Huang, Chao Zhao, Meng Li, Zhenpeng Li

Open access · goldAbstract read
In one paragraph

Article in Journal of cellular and molecular medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.1field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Peipei ZhouSchool of Medical Laboratory, Weifang Medical University, Weifang, China.
Jie ShenSchool of Medical Laboratory, Weifang Medical University, Weifang, China.
Xiao GeSchool of Medical Laboratory, Weifang Medical University, Weifang, China.
Fang DingRespiratory Medicine, Affiliated Hospital of Weifang Medical University, Weifang, China.
Hong ZhangSchool of Public Health, Weifang Medical University, Weifang, China.
Xinlin HuangSchool of Medical Laboratory, Weifang Medical University, Weifang, China.
Chao ZhaoOffice of Academic Affairs, Weifang Medical University, Weifang, China.
Meng LiSchool of Medical Laboratory, Weifang Medical University, Weifang, China.
Zhenpeng LiSchool of Medical Laboratory, Weifang Medical University, Weifang, China.ORCID 0000-0002-6113-7882
Weifang Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Around the world, tuberculosis (TB) remains one of the most common causes of morbidity and mortality. The molecular mechanism of Mycobacterium tuberculosis (Mtb) infection is still unclear. Extracellular vesicles (EVs) play a key role in the onset and progression of many disease states and can serve as effective biomarkers or therapeutic targets for the identification and treatment of TB patients. We analysed the expression profile to better clarify the EVs characteristics of TB and explored potential diagnostic markers to distinguish TB from healthy control (HC). Twenty EVs-related differentially expressed genes (DEGs) were identified, and 17 EVs-related DEGs were up-regulated and three DEGs were down-regulated in TB samples, which were related to immune cells. Using machine learning, a nine EVs-related gene signature was identified and two EVs-related subclusters were defined. The single-cell RNA sequence (scRNA-seq) analysis further confirmed that these hub genes might play important roles in TB pathogenesis. The nine EVs-related hub genes had excellent diagnostic values and accurately estimated TB progression. TB's high-risk group had significantly enriched immune-related pathways, and there were substantial variations in immunity across different groups. Furthermore, five potential drugs were predicted for TB using CMap database. Based on the EVs-related gene signature, the TB risk model was established through a comprehensive analysis of different EV patterns, which can accurately predict TB. These genes could be used as novel biomarkers to distinguish TB from HC. These findings lay the foundation for further research and design of new therapeutic interventions aimed at treating this deadly infectious disease.

Indexed as

Extracellular VesiclesMycobacterium tuberculosisTuberculosisBiomarkersHumansBiomarkersbiomarkersextracellular vesiclesimmune cell profilessingle-cell RNA sequencesubclusterstuberculosis

Identifiers

PMID37409682
PMCPMC10468662
OpenAlexW4383303142

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.