Evidence map›Paper›PMID 37410820›Full record

ArticleScience (New York, N.Y.)2023

Structural basis of gRNA stabilization and mRNA recognition in trypanosomal RNA editing.

Shiheng Liu, Hong Wang, Xiaorun Li, Fan Zhang, Jane K J Lee, Zihang Li, Clinton Yu, Jason J Hu, Xiaojing Zhao, Takuma Suematsu and 7 more

Open access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
3.5field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 17 citations in OpenAlex.

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  18. Deep mutational scanning of the RNase III-like domain inFrontiers in cellular and infection microbiology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 5 institutions in 2 countries.

Shiheng Liu *Department of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, CA, USA.ORCID 0000-0002-0561-1981
Hong Wang *Department of Molecular and Cell Biology, Boston University Medical Campus, Boston, MA, USA.ORCID 0000-0002-5767-2882
Xiaorun LiDepartment of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, CA, USA.ORCID 0000-0003-2100-7554
Fan ZhangSchool of Life Science and Technology, ShanghaiTech University, Shanghai, China.ORCID 0000-0002-2858-0698
Jane K J LeeDepartment of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, CA, USA.ORCID 0000-0001-7735-7647
Zihang LiDepartment of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, CA, USA.ORCID 0000-0002-4625-9283
Clinton YuDepartment of Physiology and Biophysics, University of California, Irvine, CA, USA.ORCID 0000-0002-2931-5474
Jason J HuDepartment of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, CA, USA.ORCID 0000-0002-1103-2177
Xiaojing ZhaoSchool of Life Science and Technology, ShanghaiTech University, Shanghai, China.
Takuma SuematsuDepartment of Molecular and Cell Biology, Boston University Medical Campus, Boston, MA, USA.ORCID 0000-0003-1430-6580
Ana L Alvarez-CabreraDepartment of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, CA, USA.ORCID 0000-0001-7186-9393
Qiushi LiuDepartment of Molecular and Cell Biology, Boston University Medical Campus, Boston, MA, USA.
Liye ZhangSchool of Life Science and Technology, ShanghaiTech University, Shanghai, China.ORCID 0000-0003-2104-6828
Lan HuangDepartment of Physiology and Biophysics, University of California, Irvine, CA, USA.ORCID 0000-0002-3140-4687
Inna AphasizhevaDepartment of Molecular and Cell Biology, Boston University Medical Campus, Boston, MA, USA.ORCID 0000-0003-2695-2950
Ruslan AphasizhevDepartment of Molecular and Cell Biology, Boston University Medical Campus, Boston, MA, USA.ORCID 0000-0002-4595-6618
Z Hong ZhouDepartment of Microbiology, Immunology, and Molecular Genetics, University of California, Los Angeles, CA, USA.ORCID 0000-0002-8373-4717
California NanoSystems Institute · USBoston Medical Center · USShanghaiTech University · CNUniversity of California, Irvine · USBoston University · US

Funding

Proteomics of the Proteasome Interacting NetworksR01GM074830 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI HUANG, LAN · 2005 to 2022
$6.1M
Guide RNA Binding ComplexR01AI101057 · NIAID · UNIVERSITY OF CALIFORNIA-IRVINE · PI Ruslan Afasizhev · 2012 to 2026
$6.0M
High-Resolution CryoEM Reconstruction of Large ComplexesR01GM071940 · NIGMS · UNIVERSITY OF TEXAS HLTH SCI CTR HOUSTON · PI ZHOU, Z HONG · 2006 to 2025
$5.0M
REPEAT-CONTAINING RNA BINDING PROTEINS OF TRYPANOSOMESR01AI113157 · NIAID · BOSTON UNIVERSITY MEDICAL CAMPUS · PI AFASIZHEVA, INNA · 2015 to 2024
$4.6M
Supplement: Advancing Proteomics Technologies to Decipher the Ubiquitin-Proteasome SystemR35GM145249 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI Lan Huang · 2022 to 2026
$3.2M
West/Midwest Consortium for High-Resolution Cryo Electron MicroscopyU24GM116792 · NIGMS · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI AGBANDJE-MCKENNA, MAVIS, DOKLAND, TERJE · 2016 to 2020
$3.0M
TRANSCRIPTIONAL CONTROL OF MITOCHONDRIAL GENE EXPRESSION IN TRYPANOSOMESR01AI152408 · NIAID · BOSTON UNIVERSITY MEDICAL CAMPUS · PI AFASIZHEV, RUSLAN · 2020 to 2024
$2.1M
HIGH-END CRYOEM INSTRUMENT FOR UCLA ELECTRON IMAGING CTR FOR NANOMACHINES: AIDSS10RR023057 · NCRR · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ZHOU, Z HONG · 2006 to 2006
$1.6M
Direct Detection Device for atomic resolution cryoEM of macromolecular complexesS10OD018111 · OD · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI ZHOU, Z HONG · 2014 to 2014
$598k
NCRR NIH HHS S10 RR023057NIAID NIH HHS R01 AI101057NIAID NIH HHS R01 AI113157NIAID NIH HHS R01 AI152408NIGMS NIH HHS R01 GM071940NIGMS NIH HHS R01 GM074830NIGMS NIH HHS R35 GM145249NIGMS NIH HHS U24 GM116792NIH HHS S10 OD018111
6 · The paper itself

Abstract

In

Indexed as

RNA EditingRNA, Guide, KinetoplastidaRNA, MessengerRNA, ProtozoanRNA StabilityTrypanosoma brucei bruceiCryoelectron MicroscopyProtozoan ProteinsProtozoan ProteinsRNA, Guide, KinetoplastidaRNA, MessengerRNA, Protozoan

Identifiers

PMID37410820
PMCPMC10704856
OpenAlexW4383313715

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.