Evidence map›Paper›PMID 37445800›Full record

ArticleInternational journal of molecular sciences2023

Immune Cell-Related Genes in Juvenile Idiopathic Arthritis Identified Using Transcriptomic and Single-Cell Sequencing Data.

Wenbo Zhang, Zhe Cai, Dandan Liang, Jiaochan Han, Ping Wu, Jiayi Shan, Guangxun Meng, Huasong Zeng

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
7.3field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Wenbo ZhangThe Joint Center for Infection and Immunity, Guangzhou Institute of Pediatrics, Guangzhou Women and Children's Medical Center, Guangzhou 510623, China.
Zhe CaiDepartment of Allergy, Immunology and Rheumatology, Guangzhou Women and Children's Medical Center, Guangzhou Medical University, Guangzhou 510623, China.
Dandan LiangThe First Clinical Medical School, Guangzhou University of Chinese Medicine, Guangzhou 510006, China.
Jiaochan HanDepartment of Allergy, Immunology and Rheumatology, Guangzhou Women and Children's Medical Center, Guangzhou Medical University, Guangzhou 510623, China.
Ping WuDepartment of Allergy, Immunology and Rheumatology, Guangzhou Women and Children's Medical Center, Guangzhou Medical University, Guangzhou 510623, China.
Jiayi ShanThe First Clinical Medical School, Guangzhou University of Chinese Medicine, Guangzhou 510006, China.
Guangxun MengThe Joint Center for Infection and Immunity, CAS Key Laboratory of Molecular Virology & Immunology, Chinese Academy of Sciences, Shanghai 200031, China.ORCID 0000-0003-4634-4661
Huasong ZengThe Joint Center for Infection and Immunity, Guangzhou Institute of Pediatrics, Guangzhou Women and Children's Medical Center, Guangzhou 510623, China.
Guangzhou Women and Children Medical Center · CNGuangzhou University of Chinese Medicine · CNChinese Academy of Sciences · CN

Funding

The National Natural Science Foundation of China NO. 82271858The Natural Science Foundation of Guangdong Province No. 2020A1515110193The PhD research startup foundation of Guangzhou Women and Children's Medical Center No. 3001197-04
6 · The paper itself

Abstract

Juvenile idiopathic arthritis (JIA) is the most common chronic rheumatic disease in children. The heterogeneity of the disease can be investigated via single-cell RNA sequencing (scRNA-seq) for its gap in the literature. Firstly, five types of immune cells (plasma cells, naive CD4 T cells, memory-activated CD4 T cells, eosinophils, and neutrophils) were significantly different between normal control (NC) and JIA samples. WGCNA was performed to identify genes that exhibited the highest correlation to differential immune cells. Then, 168 differentially expressed immune cell-related genes (DE-ICRGs) were identified by overlapping 13,706 genes identified by WGCNA and 286 differentially expressed genes (DEGs) between JIA and NC specimens. Next, four key genes, namely

Indexed as

Arthritis, JuvenileChildGene Expression ProfilingHumansLectins, C-TypeMembrane GlycoproteinsMonocytesReceptors, ImmunologicSuppressor of Cytokine Signaling ProteinsTranscriptomeTumor Necrosis Factor-alphaCLEC4C protein, humanLectins, C-TypeMembrane GlycoproteinsReceptors, ImmunologicSuppressor of Cytokine Signaling ProteinsTumor Necrosis Factor-alphajuvenile idiopathic arthritismachine learning analysisprotein–protein interactionsingle-cell RNA sequencingWGCNA

Identifiers

PMID37445800
PMCPMC10342059
OpenAlexW4382137951

What Socratic holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.