Evidence map›Paper›PMID 37446321›Full record

ArticleInternational journal of molecular sciences2023

System Biology Investigation Revealed Lipopolysaccharide and Alcohol-Induced Hepatocellular Carcinoma Resembled Hepatitis B Virus Immunobiology and Pathogenesis.

Vishal S Patil, Darasaguppe R Harish, Ganesh H Sampat, Subarna Roy, Sunil S Jalalpure, Pukar Khanal, Swarup S Gujarathi, Harsha V Hegde

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Review
  5. Review
  6. Article
  7. Gene Expression Aberrations in Alcohol-Associated Hepatocellular Carcinoma.International journal of molecular sciences · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Vishal S PatilICMR-National Institute of Traditional Medicine, Nehru Nagar, Belagavi 590010, India.ORCID 0000-0002-1219-1962
Darasaguppe R HarishICMR-National Institute of Traditional Medicine, Nehru Nagar, Belagavi 590010, India.ORCID 0000-0002-3609-549X
Ganesh H SampatICMR-National Institute of Traditional Medicine, Nehru Nagar, Belagavi 590010, India.
Subarna RoyICMR-National Institute of Traditional Medicine, Nehru Nagar, Belagavi 590010, India.ORCID 0000-0002-6594-8615
Sunil S JalalpureKLE College of Pharmacy, Belagavi, KLE Academy of Higher Education and Research, Belagavi 590010, India.ORCID 0000-0001-7598-5973
Pukar KhanalKLE College of Pharmacy, Belagavi, KLE Academy of Higher Education and Research, Belagavi 590010, India.ORCID 0000-0002-8187-2120
Swarup S GujarathiICMR-National Institute of Traditional Medicine, Nehru Nagar, Belagavi 590010, India.
Harsha V HegdeICMR-National Institute of Traditional Medicine, Nehru Nagar, Belagavi 590010, India.
KLE University · IN

Funding

Indian Council of Medical Research ISRM/12(61)2019
6 · The paper itself

Abstract

Hepatitis B infection caused by the hepatitis B virus is a life-threatening cause of liver fibrosis, cirrhosis, and hepatocellular carcinoma. Researchers have produced multiple in vivo models for hepatitis B virus (HBV) and, currently, there are no specific laboratory animal models available to study HBV pathogenesis or immune response; nonetheless, their limitations prevent them from being used to study HBV pathogenesis, immune response, or therapeutic methods because HBV can only infect humans and chimpanzees. The current study is the first of its kind to identify a suitable chemically induced liver cirrhosis/HCC model that parallels HBV pathophysiology. Initially, data from the peer-reviewed literature and the GeneCards database were compiled to identify the genes that HBV and seven drugs (acetaminophen, isoniazid, alcohol, D-galactosamine, lipopolysaccharide, thioacetamide, and rifampicin) regulate. Functional enrichment analysis was performed in the STRING server. The network HBV/Chemical, genes, and pathways were constructed by Cytoscape 3.6.1. About 1546 genes were modulated by HBV, of which 25.2% and 17.6% of the genes were common for alcohol and lipopolysaccharide-induced hepatitis. In accordance with the enrichment analysis, HBV activates the signaling pathways for apoptosis, cell cycle, PI3K-Akt, TNF, JAK-STAT, MAPK, chemokines, NF-kappa B, and TGF-beta. In addition, alcohol and lipopolysaccharide significantly activated these pathways more than other chemicals, with higher gene counts and lower FDR scores. In conclusion, alcohol-induced hepatitis could be a suitable model to study chronic HBV infection and lipopolysaccharide-induced hepatitis for an acute inflammatory response to HBV.

Indexed as

Carcinoma, HepatocellularHepatitis, AlcoholicHepatitis BHepatitis B, ChronicLiver NeoplasmsAnimalsBiologyEthanolHepatitis B virusHumansLipopolysaccharidesLiver CirrhosisPhosphatidylinositol 3-KinasesEthanolLipopolysaccharidesPhosphatidylinositol 3-Kinasesalcoholhepatitis Bhepatocellular carcinomalipopolysaccharidenetwork pharmacologyrodent model

Identifiers

PMID37446321
PMCPMC10342420
OpenAlexW4383551709

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.