Evidence map›Paper›PMID 37452219›Full record

ArticlePlant cell reports2023

Potential candidate genes and pathways related to cytoplasmic male sterility in Dianthus spiculifolius as revealed by transcriptome analysis.

Yingzhu Liu, Han Sun, Rong Ye, Jinxue Du, Haizhen Zhang, Aimin Zhou, Kun Qiao, Jingang Wang

Abstract read
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In one paragraph

Article in Plant cell reports, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.5field-weighted citation impact, top 33% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 3 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Yingzhu Liu *College of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, China.
Han Sun *College of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, China.
Rong YeCollege of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, China.
Jinxue DuCollege of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, China.
Haizhen ZhangCollege of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, China.
Aimin ZhouCollege of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, China.
Kun QiaoCollege of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, China.
Jingang WangCollege of Horticulture and Landscape Architecture, Northeast Agricultural University, Harbin, 150030, China. wangjingang99@neau.edu.cn.ORCID http://orcid.org/0000-0003-1944-7948
Northeast Agricultural University · CN

Funding

China Postdoctoral Science Foundation funded project 2021M700739National Natural Science Foundation of China 31972450National Natural Science Foundation of China 32102420Natural Science Foundation of Heilongjiang Province of China YQ2021C014
6 · The paper itself

Abstract

key messageWe introduced the candidate gene DsHSP70 into Arabidopsis thaliana, resulting in male gametophyte sterility and abnormal degeneration of sepals and petals. Cytoplasmic male sterility (CMS) is a useful tool for hybrid production. However, the regulatory mechanism of CMS in Dianthus spiculifolius remains unclear. In this study, we investigated whether male-sterile line of D. spiculifolius has a malformed tapetum and fails to produce normal fertile pollen. RNA sequencing technology was used to compare the gene expression patterns of the D. spiculifolius male-sterile line and its male fertility maintainer line during anther development. A total of 12,365 differentially expressed genes (DEGs) were identified, among which 1765 were commonly expressed in the S1, S2 and S3 stages. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) analyses indicated that these DEGs were mainly involved in oxidation-reduction processes, signal transduction and programmed cell death. Additionally, weighted correlation network analysis (WGCNA) showed that three modules may be related to male sterility. A putative regulatory pathway for the male sterility traits was constructed based on the reproductive development network. After introducing the candidate DsHSP70 gene into Arabidopsis thaliana, we found that overexpressing plants showed anther abortion and shorter filaments, and accompanied by abnormal degeneration of sepals and petals. In summary, our results identified potential candidate genes and pathways related to CMS in D. spiculifolius, providing new insights for further research on the mechanism of male sterility.

Indexed as

ArabidopsisDianthusInfertility, MaleFlowersGene Expression ProfilingGene Expression Regulation, PlantHumansMalePlant InfertilityTranscriptomeDianthus spiculifoliusDifferentially expressed genesMale sterilityProgrammed cell deathTranscriptome

Identifiers

PMID37452219
OpenAlexW4384296834

What Socratic holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.