Evidence map›Paper›PMID 37458938›Full record

ArticleJournal, genetic engineering & biotechnology2023

Association of the single nucleotide polymorphism in CAPN3 gene with growth performance in Merino and Garut (MEGA) backcross sheep.

Puruhita, Ronny Rachman Noor, Endang Tri Margawati, Herman W Raadsma

Open access · diamondAbstract read
In one paragraph

Article in Journal, genetic engineering & biotechnology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.4field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 2 citations in OpenAlex.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 3 countries.

PuruhitaFaculty of Animal Science, IPB University, Bogor, 16680, Indonesia.
Ronny Rachman NoorDepartment of Animal Production and Technology, Faculty of Animal Science, IPB University, Bogor, 16680, Indonesia.
Endang Tri MargawatiResearch Centre for Applied Zoology, National Research and Innovation Agency, BRIN, Jalan Raya Bogor KM. 46, Cibinong, Bogor, 16911, West Java, Indonesia. endangtri015@gmail.com.ORCID http://orcid.org/0000-0002-4679-6783
Herman W RaadsmaCenter for Advanced Technologies for Animal Genetics and Reproduction, Faculty of Veterinary Science, University of Sydney, Camden, NSW, 2006, Australia.
IPB University · IDCenter for Plant Conservation · USThe University of Sydney · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSheep is one of the commodities of livestock which has been known widely in Indonesia for supporting the national food security. Improvement in genetic quality by selection based on genetic markers for growth is necessary to increase meat production. Quantitative trait loci (QTL) analysis in sheep suggests that Calpain 3 gene (CAPN3) gene might be one of the candidate loci affecting growth traits. CAPN3 is located on chromosome 7 sheep expressed in the skeletal muscles. The aim of this study was to investigate polymorphism CAPN3 intron 11 in Merino × Garut (MEGA) backcross using the PCR-RLFP method and to determine their association with growth traits.

resultsSNP intron 11 CAPN3 | BseSI of Merino × Garut (MEGA) backcross sheep was polymorphic and resulted in two alleles of C and T with a frequency of 0.76 and 0.24, respectively, and CC, CT, and TT genotypes with a frequency of 0.54, 0.43, and 0.02, respectively. These loci were found to be in Hardy-Weinberg equilibrium. The SNP CAPN3 | BseSI significantly affected (P < 0.05) the birth weight in Merino × Garut (MEGA) backcross sheep.

conclusionThis result suggests that the CAPN3 | BseSI can be used as a genetic marker for birth weight trait in sheep.

Indexed as

BseSICAPN3 geneGrowth traitsMEGA sheepPCR–RFLPSNP

Identifiers

PMID37458938
PMCPMC10352187
OpenAlexW4384524002

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.