Evidence map›Paper›PMID 37459526›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2023

Increased gene expression variability hinders the formation of regional mechanical conflicts leading to reduced organ shape robustness.

Duy-Chi Trinh, Marjolaine Martin, Lotte Bald, Alexis Maizel, Christophe Trehin, Olivier Hamant

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
10.7field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 27 citations in OpenAlex.

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  10. What Is a Plant Cell Type in the Age of Single-Cell Biology? It's Complicated.Annual review of cell and developmental biology · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 3 countries.

Duy-Chi TrinhLaboratoire de Reproduction et Développement des Plantes, Université de Lyon, Ecole Normale Supérieure de Lyon, Université Claude Bernard Lyon, Institut National de la Recherche pour l'Agriculture, l'Alimentation et l'Environnement, CNRS, 69364 Lyon Cedex 07, France.ORCID 0000-0001-6570-9465
Marjolaine MartinLaboratoire de Reproduction et Développement des Plantes, Université de Lyon, Ecole Normale Supérieure de Lyon, Université Claude Bernard Lyon, Institut National de la Recherche pour l'Agriculture, l'Alimentation et l'Environnement, CNRS, 69364 Lyon Cedex 07, France.
Lotte BaldCenter for Organismal Studies, University of Heidelberg, 69120 Heidelberg, Germany.ORCID 0000-0002-9471-2716
Alexis MaizelCenter for Organismal Studies, University of Heidelberg, 69120 Heidelberg, Germany.ORCID 0000-0001-6843-1059
Christophe TrehinLaboratoire de Reproduction et Développement des Plantes, Université de Lyon, Ecole Normale Supérieure de Lyon, Université Claude Bernard Lyon, Institut National de la Recherche pour l'Agriculture, l'Alimentation et l'Environnement, CNRS, 69364 Lyon Cedex 07, France.
Olivier HamantLaboratoire de Reproduction et Développement des Plantes, Université de Lyon, Ecole Normale Supérieure de Lyon, Université Claude Bernard Lyon, Institut National de la Recherche pour l'Agriculture, l'Alimentation et l'Environnement, CNRS, 69364 Lyon Cedex 07, France.ORCID 0000-0001-6906-6620
Université Claude Bernard Lyon 1 · FRHeidelberg University · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To relate gene networks and organ shape, one needs to address two wicked problems: i) Gene expression is often variable locally, and shape is reproducible globally; ii) gene expression can have cascading effects on tissue mechanics, with possibly counterintuitive consequences for the final organ shape. Here, we address such wicked problems, taking advantage of simpler plant organ development where shape only emerges from cell division and elongation. We confirm that mutation in VERNALIZATION INDEPENDENCE 3 (

Indexed as

ArabidopsisArabidopsis ProteinsCell DivisionCell ProliferationGene ExpressionNucleotidyltransferasesArabidopsis ProteinsNucleotidyltransferasesmechanical conflictmicrotubulesPaf1Cplant morphogenesistranscriptional noise

Identifiers

PMID37459526
PMCPMC10372692
OpenAlexW4384498463

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.