Evidence map›Paper›PMID 37463421›Full record

ArticleMolecular biology and evolution2023

High-Altitude Andean H194R HIF2A Allele Is a Hypomorphic Allele.

Kelsey Jorgensen, Daisheng Song, Julien Weinstein, Obed A Garcia, Laurel N Pearson, María Inclán, Maria Rivera-Chira, Fabiola León-Velarde, Melisa Kiyamu, Tom D Brutsaert and 2 more

Abstract read
In one paragraph

Article in Molecular biology and evolution, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
  2. Article
  3. Article
  4. Genetic adaptations shaping survival, pregnancy, and life at high altitude and sea level.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
  5. Advances in Understanding Adaptive Hemoglobin Concentration at High Altitude.American journal of human biology : the official journal of the Human Biology Council · 2025
    Article
  6. Article
  7. Article
  8. Review
  9. Review
  10. Article
  11. FunctionalScience advances · 2024
    Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Kelsey JorgensenDepartment of Anthropology, University of California, Los Angeles, CA, USA.
Daisheng SongDepartment of Pathology and Laboratory Medicine, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA, USA.
Julien WeinsteinDepartment of Anthropology, The University of Michigan, Ann Arbor, MI, USA.
Obed A GarciaDepartment of Biomedical Data Science, Stanford University, Stanford, CA, USA.ORCID 0000-0001-6150-6118
Laurel N PearsonDepartment of Anthropology, The Pennsylvania State University, State College, PA, USA.
María InclánDivisión de. Estudios Políticos, Centro de Investigación y Docencia Económicas, Mexico City, CDMX, Mexico.
Maria Rivera-ChiraDepartamento de Ciencias Biológicas y Fisiológicas, Laboratorios de Investigación y Desarrollo, Facultad de Ciencias y Filosofía, Universidad Peruana Cayetano Heredia, Lima, Lima, Peru.
Fabiola León-VelardeDepartamento de Ciencias Biológicas y Fisiológicas, Laboratorios de Investigación y Desarrollo, Facultad de Ciencias y Filosofía, Universidad Peruana Cayetano Heredia, Lima, Lima, Peru.
Melisa KiyamuDepartamento de Ciencias Biológicas y Fisiológicas, Laboratorios de Investigación y Desarrollo, Facultad de Ciencias y Filosofía, Universidad Peruana Cayetano Heredia, Lima, Lima, Peru.
Tom D BrutsaertDepartment of Exercise Science, Syracuse University, Syracuse, NY, USA.
Abigail W BighamDepartment of Anthropology, University of California, Los Angeles, CA, USA.
Frank S LeeDepartment of Pathology and Laboratory Medicine, University of Pennsylvania Perelman School of Medicine, Philadelphia, PA, USA.

Funding

VIRAL VECTOR COREP30DK019525 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI DOUGLAS J EPSTEIN · 1986 to 2026
$48.3M
Control of Erythropoiesis by the Oxygen Sensor PHD2R01HL159611 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI LEE, FRANK S · 2021 to 2024
$1.6M
NHLBI NIH HHS R01 HL159611NIDDK NIH HHS P30 DK019525
6 · The paper itself

Abstract

For over 10,000 years, Andeans have resided at high altitude where the partial pressure of oxygen challenges human survival. Recent studies have provided evidence for positive selection acting in Andeans on the HIF2A (also known as EPAS1) locus, which encodes for a central transcription factor of the hypoxia-inducible factor pathway. However, the precise mechanism by which this allele might lead to altitude-adaptive phenotypes, if any, is unknown. By analyzing whole genome sequencing data from 46 high-coverage Peruvian Andean genomes, we confirm evidence for positive selection acting on HIF2A and a unique pattern of variation surrounding the Andean-specific single nucleotide variant (SNV), rs570553380, which encodes for an H194R amino acid substitution in HIF-2α. Genotyping the Andean-associated SNV rs570553380 in a group of 299 Peruvian Andeans from Cerro de Pasco, Peru (4,338 m), reveals a positive association with increased fraction of exhaled nitric oxide, a marker of nitric oxide biosynthesis. In vitro assays show that the H194R mutation impairs binding of HIF-2α to its heterodimeric partner, aryl hydrocarbon receptor nuclear translocator. A knockin mouse model bearing the H194R mutation in the Hif2a gene displays decreased levels of hypoxia-induced pulmonary Endothelin-1 transcripts and protection against hypoxia-induced pulmonary hypertension. We conclude the Andean H194R HIF2A allele is a hypomorphic (partial loss of function) allele.

Indexed as

AltitudeNitric OxideAdaptation, PhysiologicalAllelesAnimalsBasic Helix-Loop-Helix ProteinsEndothelial PAS Domain-Containing Protein 1HumansHypoxiaMiceBasic Helix-Loop-Helix ProteinsEndothelial PAS Domain-Containing Protein 1Nitric OxideAndean evolutionEPAS1HIF2Ahigh-altitude adaptationhypoxiahypoxia-inducible factor

Identifiers

PMID37463421
PMCPMC10370452

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.