Evidence map›Paper›PMID 37463962›Full record

ArticleNature communications2023

RUFY3 regulates endolysosomes perinuclear positioning, antigen presentation and migration in activated phagocytes.

Rémy Char, Zhuangzhuang Liu, Cédric Jacqueline, Marion Davieau, Maria-Graciela Delgado, Clara Soufflet, Mathieu Fallet, Lionel Chasson, Raphael Chapuy, Voahirana Camosseto and 11 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Article
  3. AccurateInternational journal of molecular sciences · 2025
    Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 5 institutions in 3 countries.

Rémy CharAix Marseille Université, CNRS, INSERM, CIML, 13288, Marseille, cedex 9, France.
Zhuangzhuang LiuSchool of Laboratory Medicine, Xinxiang Medical University, Xinxiang, PR China.
Cédric JacquelineNantes Université, CHU Nantes, INSERM, Center for Research in Transplantation and Translational Immunology, UMR1064, F-44000, Nantes, France.ORCID 0000-0001-9606-5930
Marion DavieauNantes Université, CHU Nantes, INSERM, Center for Research in Transplantation and Translational Immunology, UMR1064, F-44000, Nantes, France.
Maria-Graciela DelgadoINSERM U932, Institut Curie, ANR-10-IDEX-0001-02 PSL* and ANR-11-LABX-0043, Paris, France.
Clara SouffletAix Marseille Université, CNRS, INSERM, CIML, 13288, Marseille, cedex 9, France.
Mathieu FalletAix Marseille Université, CNRS, INSERM, CIML, 13288, Marseille, cedex 9, France.
Lionel ChassonAix Marseille Université, CNRS, INSERM, CIML, 13288, Marseille, cedex 9, France.
Raphael ChapuyAix Marseille Université, CNRS, INSERM, CIML, 13288, Marseille, cedex 9, France.
Voahirana CamossetoAix Marseille Université, CNRS, INSERM, CIML, 13288, Marseille, cedex 9, France.
Eva StrockAix Marseille Université, CNRS, INSERM, CIML, 13288, Marseille, cedex 9, France.
Rejane RuaAix Marseille Université, CNRS, INSERM, CIML, 13288, Marseille, cedex 9, France.
Catarina R AlmeidaInstitute of Biomedicine (iBiMED), Department of Medical Sciences, University of Aveiro, 3810-193, Aveiro, Portugal.ORCID 0000-0001-6670-6004
Bing SuShanghai Institute of Immunology, Department of Microbiology and Immunology, Shanghai Jiao Tong University School of Medicine, Shanghai, 200025, PR China.ORCID 0000-0003-0871-7666
Ana-Maria Lennon-DuménilINSERM U932, Institut Curie, ANR-10-IDEX-0001-02 PSL* and ANR-11-LABX-0043, Paris, France.
Beatrice NalAix Marseille Université, CNRS, INSERM, CIML, 13288, Marseille, cedex 9, France.ORCID 0000-0003-3452-7524
Antoine RoquillyNantes Université, CHU Nantes, INSERM, Center for Research in Transplantation and Translational Immunology, UMR1064, F-44000, Nantes, France.
Yinming LiangSchool of Laboratory Medicine, Xinxiang Medical University, Xinxiang, PR China.ORCID 0000-0001-9174-4037
Stéphane MéresseAix Marseille Université, CNRS, INSERM, CIML, 13288, Marseille, cedex 9, France.ORCID 0000-0001-6578-5177
Evelina GattiAix Marseille Université, CNRS, INSERM, CIML, 13288, Marseille, cedex 9, France. gatti@ciml.univ-mrs.fr.
Philippe PierreAix Marseille Université, CNRS, INSERM, CIML, 13288, Marseille, cedex 9, France. pierre@ciml.univ-mrs.fr.ORCID 0000-0003-0863-8255
Centre National de la Recherche Scientifique · FRInserm · FRXinxiang Medical University · CNShanghai Jiao Tong University · CNUniversity of Aveiro · PT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Endo-lysosomes transport along microtubules and clustering in the perinuclear area are two necessary steps for microbes to activate specialized phagocyte functions. We report that RUN and FYVE domain-containing protein 3 (RUFY3) exists as two alternative isoforms distinguishable by the presence of a C-terminal FYVE domain and by their affinity for phosphatidylinositol 3-phosphate on endosomal membranes. The FYVE domain-bearing isoform (iRUFY3) is preferentially expressed in primary immune cells and up-regulated upon activation by microbes and Interferons. iRUFY3 is necessary for ARL8b + /LAMP1+ endo-lysosomes positioning in the pericentriolar organelles cloud of LPS-activated macrophages. We show that iRUFY3 controls macrophages migration, MHC II presentation and responses to Interferon-γ, while being important for intracellular Salmonella replication. Specific inactivation of rufy3 in phagocytes leads to aggravated pathologies in mouse upon LPS injection or bacterial pneumonia. This study highlights the role of iRUFY3 in controlling endo-lysosomal dynamics, which contributes to phagocyte activation and immune response regulation.

Indexed as

Antigen PresentationLipopolysaccharidesAnimalsCytoskeletal ProteinsEndosomesLysosomesMicePhagocytesCytoskeletal ProteinsLipopolysaccharidesRufy3 protein, mouse

Identifiers

PMID37463962
PMCPMC10354229
OpenAlexW4384662592

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.