Evidence map›Paper›PMID 37486739›Full record

ArticleMicrobial genomics2023

Whole-genome sequencing of

Vasilli Kasimov, Rhys T White, Jonathan Foxwell, Cheryl Jenkins, Kristene Gedye, Yvonne Pannekoek, Martina Jelocnik

Open access · goldAbstract read
In one paragraph

Article in Microbial genomics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed, 1 pooled it
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 1 synthesis or guideline pooled it, 17 citations in OpenAlex.

  1. Current status and future directions ofFrontiers in veterinary science · 2026
    Pooled it
  2. Article
  3. Article
  4. Article
  5. Genomic epidemiology of a novelFrontiers in cellular and infection microbiology · 2025
    Article
  6. Virulence · 2024
    Review
  7. Outbreak ofAnimals : an open access journal from MDPI · 2024
    Article
  8. Genomic profiling and characterization of ocularMicrobiology resource announcements · 2024
    Article
  9. Complete genome sequence ofMicrobiology resource announcements · 2024
    Article
  10. Detection ofPathogens (Basel, Switzerland) · 2024
    Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 6 institutions in 3 countries.

Vasilli KasimovUniversity of the Sunshine Coast, Centre for Bioinnovation, Sippy Downs, Sunshine Coast, QLD 4557, Australia.
Rhys T WhiteUniversity of the Sunshine Coast, Centre for Bioinnovation, Sippy Downs, Sunshine Coast, QLD 4557, Australia.
Jonathan FoxwellAnimal Health Laboratory, Ministry for Primary Industries, 66 Ward Street, Upper Hutt 5018, New Zealand.
Cheryl JenkinsNSW Department of Primary Industries, Elizabeth Macarthur Agricultural Institute, Menangle, New South Wales 2568, Australia.
Kristene GedyeMassey University, School of Veterinary Science, Palmerston North 4442, New Zealand.
Yvonne PannekoekUniversity of Amsterdam, Amsterdam UMC, Department of Medical Microbiology and Infection Prevention, Amsterdam 1105, Netherlands.
Martina JelocnikUniversity of the Sunshine Coast, Centre for Bioinnovation, Sippy Downs, Sunshine Coast, QLD 4557, Australia.
University of the Sunshine Coast · AUAmsterdam University Medical Centers · NLMassey University · NZMinistry for Primary Industries · NZNew South Wales Department of Primary Industries · AUThe University of Queensland · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

Chlamydophila psittaciPsittacosisAnimalsAustraliaColumbidaeFeathersGenomicsMultilocus Sequence TypingAustraliabirdsChlamydia psittaciculture-independent sequencingmulti-locus sequence typing (MLST)New Zealandnovel sequence type (ST)phylogenomics

Identifiers

PMID37486739
PMCPMC10438822
OpenAlexW4385186366

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.