Evidence map›Paper›PMID 37500638›Full record

ArticleNature communications2023

Loss of N-terminal acetyltransferase A activity induces thermally unstable ribosomal proteins and increases their turnover in Saccharomyces cerevisiae.

Ulises H Guzman, Henriette Aksnes, Rasmus Ree, Nicolai Krogh, Magnus E Jakobsson, Lars J Jensen, Thomas Arnesen, Jesper V Olsen

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 19 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Ribosome-associated proteins: unwRAPping ribosome heterogeneity in the twenty-first century.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
    Review
  5. Review
  6. Article
  7. Review
  8. Conformational plasticity links structural instability of NAA10Computational and structural biotechnology journal · 2024
    Article
  9. Review
  10. Automated Immunoprecipitation Workflow for Comprehensive Acetylome Analysis.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  11. Acetyltransferase in cardiovascular disease and aging.The journal of cardiovascular aging · 2024
    Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 3 countries.

Ulises H GuzmanNovo Nordisk Foundation Center for Protein Research, Proteomics Program, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.
Henriette AksnesDepartment of Biomedicine, University of Bergen, Bergen, Norway.ORCID 0000-0003-4968-2324
Rasmus ReeDepartment of Biomedicine, University of Bergen, Bergen, Norway.ORCID 0000-0002-8446-5301
Nicolai KroghDepartment of Cellular and Molecular Medicine, University of Copenhagen, Copenhagen, Denmark.
Magnus E JakobssonNovo Nordisk Foundation Center for Protein Research, Proteomics Program, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.
Lars J JensenNovo Nordisk Foundation Center for Protein Research, Proteomics Program, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark.ORCID 0000-0001-7885-715X
Thomas ArnesenDepartment of Biomedicine, University of Bergen, Bergen, Norway. thomas.arnesen@uib.no.ORCID 0000-0002-3005-147X
Jesper V OlsenNovo Nordisk Foundation Center for Protein Research, Proteomics Program, Faculty of Health and Medical Sciences, University of Copenhagen, Copenhagen, Denmark. jesper.olsen@cpr.ku.dk.ORCID 0000-0002-4747-4938
University of Copenhagen · DKUniversity of Bergen · NOHaukeland University Hospital · NO

Funding

European Research Council EPIC-XS-823839
6 · The paper itself

Abstract

Protein N-terminal (Nt) acetylation is one of the most abundant modifications in eukaryotes, covering ~50-80 % of the proteome, depending on species. Cells with defective Nt-acetylation display a wide array of phenotypes such as impaired growth, mating defects and increased stress sensitivity. However, the pleiotropic nature of these effects has hampered our understanding of the functional impact of protein Nt-acetylation. The main enzyme responsible for Nt-acetylation throughout the eukaryotic kingdom is the N-terminal acetyltransferase NatA. Here we employ a multi-dimensional proteomics approach to analyze Saccharomyces cerevisiae lacking NatA activity, which causes global proteome remodeling. Pulsed-SILAC experiments reveals that NatA-deficient strains consistently increase degradation of ribosomal proteins compared to wild type. Explaining this phenomenon, thermal proteome profiling uncovers decreased thermostability of ribosomes in NatA-knockouts. Our data are in agreement with a role for Nt-acetylation in promoting stability for parts of the proteome by enhancing the avidity of protein-protein interactions and folding.

Indexed as

N-Terminal AcetyltransferasesSaccharomyces cerevisiae ProteinsAcetylationAcetyltransferasesN-Terminal Acetyltransferase AN-Terminal Acetyltransferase EProteomeRibosomal ProteinsSaccharomyces cerevisiaeAcetyltransferasesN-Terminal Acetyltransferase AN-Terminal Acetyltransferase EN-Terminal AcetyltransferasesProteomeRibosomal ProteinsSaccharomyces cerevisiae Proteins

Identifiers

PMID37500638
PMCPMC10374663
OpenAlexW4385305889

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.