Evidence map›Paper›PMID 37500667›Full record

ArticleNature communications2023

MAPK inhibitor sensitivity scores predict sensitivity driven by the immune infiltration in pediatric low-grade gliomas.

Romain Sigaud, Thomas K Albert, Caroline Hess, Thomas Hielscher, Nadine Winkler, Daniela Kocher, Carolin Walter, Daniel Münter, Florian Selt, Diren Usta and 26 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
10.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 36 citations in OpenAlex.

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  4. RAS/MAPK inhibition in pediatric gliomas.Neuro-oncology advances · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

36 authors at 9 institutions in 4 countries.

Romain SigaudHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany. r.sigaud@kitz-heidelberg.de.ORCID 0000-0002-8600-8876
Thomas K AlbertDepartment of Pediatric Hematology and Oncology, University Children's Hospital Münster, Münster, Germany.ORCID 0000-0002-2488-0706
Caroline HessHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany.ORCID 0009-0001-7436-5067
Thomas HielscherDivision of Biostatistics, German Cancer Research Center (DKFZ) and German Consortium for Translational Cancer Research (DKTK), Heidelberg, Germany.
Nadine WinklerHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany.ORCID 0000-0002-2479-1682
Daniela KocherHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany.
Carolin WalterInstitute of Medical Informatics, University of Münster, Münster, Germany.
Daniel MünterDepartment of Pediatric Hematology and Oncology, University Children's Hospital Münster, Münster, Germany.ORCID 0000-0001-8823-0238
Florian SeltHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany.
Diren UstaHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany.
Jonas EckerHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany.
Angela BrentrupNeurosurgery Dept., University Hospital Münster, Münster, Germany.
Martin HasselblattInstitute of Neuropathology, University Hospital Münster, Münster, Germany.
Christian ThomasInstitute of Neuropathology, University Hospital Münster, Münster, Germany.ORCID 0000-0002-6642-7774
Julian VargheseInstitute of Medical Informatics, University of Münster, Münster, Germany.
David CapperBerlin Institute of Health, Anna-Louisa-Karsch-Straße 2, 10178, Berlin, Germany.
Ulrich W ThomaleCharité - Universitätsmedizin Berlin, Corporate member of Freie Universität Berlin and Humboldt-Universität zu Berlin, Department of Pediatric Neurosurgery, Berlin, Germany.
Pablo Hernáiz DrieverCharité - Universitätsmedizin Berlin, Corporate member of Freie Universität Berlin and Humboldt-Universität zu Berlin, German HIT-LOGGIC-Registry for pLGG in children and adolescents, Department of Pediatric Oncology and Hematology, Berlin, Germany.ORCID 0000-0003-3135-3872
Michèle SimonCharité - Universitätsmedizin Berlin, Corporate member of Freie Universität Berlin and Humboldt-Universität zu Berlin, German HIT-LOGGIC-Registry for pLGG in children and adolescents, Department of Pediatric Oncology and Hematology, Berlin, Germany.ORCID 0000-0001-9094-3632
Svea HornCharité - Universitätsmedizin Berlin, Corporate member of Freie Universität Berlin and Humboldt-Universität zu Berlin, German HIT-LOGGIC-Registry for pLGG in children and adolescents, Department of Pediatric Oncology and Hematology, Berlin, Germany.
Nina Annika HerzCharité - Universitätsmedizin Berlin, Corporate member of Freie Universität Berlin and Humboldt-Universität zu Berlin, German HIT-LOGGIC-Registry for pLGG in children and adolescents, Department of Pediatric Oncology and Hematology, Berlin, Germany.
Arend KochCharité - Universitätsmedizin Berlin, corporate member of Freie Universität Berlin and Humboldt-Universität zu Berlin, Department of Neuropathology, Berlin, Germany.
Felix SahmDepartment of Neuropathology, Heidelberg University Hospital, Heidelberg, Germany.ORCID 0000-0001-5441-1962
Stefan HamelmannDepartment of Neuropathology, Heidelberg University Hospital, Heidelberg, Germany.
Augusto Faria-AndradeDepartment of Human Genetics, McGill University, Montreal, QC, H3A 0C7, Canada.ORCID 0000-0001-5866-0501
Nada JabadoDepartment of Human Genetics, McGill University, Montreal, QC, H3A 0C7, Canada.ORCID 0000-0003-2485-3692
Martin U SchuhmannSection of Pediatric Neurosurgery, Department of Neurosurgery, University Hospital Tübingen, Tübingen, Germany.ORCID 0000-0001-9843-7486
Antoinette Y N Schouten-van MeeterenPrincess Màxima Center for Pediatric Oncology, Utrecht, The Netherlands.
Eelco HovingPrincess Màxima Center for Pediatric Oncology, Utrecht, The Netherlands.ORCID 0000-0002-5587-0439
Tilman BrummerInstitute of Molecular Medicine and Cell Research (IMMZ), Faculty of Medicine, University of Freiburg, Freiburg, Germany, Centre for Biological Signaling Studies BIOSS, University of Freiburg and German Consortium for Translational Cancer Research (DKTK), Freiburg, Germany, German Cancer Research Center (DKFZ), Heidelberg, Germany.ORCID 0000-0003-4387-7905
Cornelis M van TilburgHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany.ORCID 0000-0001-5274-910X
Stefan M PfisterHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany.
Olaf WittHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany.
David T W JonesHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany.ORCID 0000-0002-2036-5141
Kornelius KerlDepartment of Pediatric Hematology and Oncology, University Children's Hospital Münster, Münster, Germany.ORCID 0000-0002-5676-8102
Till MildeHopp Children's Cancer Center Heidelberg (KiTZ), Heidelberg, Germany. t.milde@kitz-heidelberg.de.ORCID 0000-0002-7267-1052
German Cancer Research Center · DEHumboldt-Universität zu Berlin · DEUniversity Hospital Münster · DEPrincess Máxima Center · NLUniversity of Münster · DEMcGill University · CAMcGill University Health Centre · CAUniversity Children's Hospital Tübingen · DEUniversity of Freiburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pediatric low-grade gliomas (pLGG) show heterogeneous responses to MAPK inhibitors (MAPKi) in clinical trials. Thus, more complex stratification biomarkers are needed to identify patients likely to benefit from MAPKi therapy. Here, we identify MAPK-related genes enriched in MAPKi-sensitive cell lines using the GDSC dataset and apply them to calculate class-specific MAPKi sensitivity scores (MSSs) via single-sample gene set enrichment analysis. The MSSs discriminate MAPKi-sensitive and non-sensitive cells in the GDSC dataset and significantly correlate with response to MAPKi in an independent PDX dataset. The MSSs discern gliomas with varying MAPK alterations and are higher in pLGG compared to other pediatric CNS tumors. Heterogenous MSSs within pLGGs with the same MAPK alteration identify proportions of potentially sensitive patients. The MEKi MSS predicts treatment response in a small set of pLGG patients treated with trametinib. High MSSs correlate with a higher immune cell infiltration, with high expression in the microglia compartment in single-cell RNA sequencing data, while low MSSs correlate with low immune infiltration and increased neuronal score. The MSSs represent predictive tools for the stratification of pLGG patients and should be prospectively validated in clinical trials. Our data supports a role for microglia in the response to MAPKi.

Indexed as

GliomaBiomarkersCell LineChildHumansProtein Kinase InhibitorsBiomarkersProtein Kinase Inhibitors

Identifiers

PMID37500667
PMCPMC10374577
OpenAlexW4385331625

What Socratic holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.