Evidence map›Paper›PMID 37510339›Full record

ArticleGenes2023

Variations in NSP1 of Porcine Reproductive and Respiratory Syndrome Virus Isolated in China from 1996 to 2022.

Zhiqing Zhang, Hang Zhang, Qin Luo, Yajie Zheng, Weili Kong, Liangzong Huang, Mengmeng Zhao

Open access · goldAbstract read
In one paragraph

Article in Genes, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.1field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 6 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Zhiqing ZhangSchool of Life Science and Engineering, Foshan University, Foshan 528000, China.
Hang ZhangSchool of Life Science and Engineering, Foshan University, Foshan 528000, China.
Qin LuoSchool of Life Science and Engineering, Foshan University, Foshan 528000, China.
Yajie ZhengSchool of Life Science and Engineering, Foshan University, Foshan 528000, China.
Weili KongGladstone Institutes of Virology and Immunology, University of California, San Francisco, CA 94158, USA.ORCID 0000-0002-9104-7730
Liangzong HuangSchool of Life Science and Engineering, Foshan University, Foshan 528000, China.
Mengmeng ZhaoSchool of Life Science and Engineering, Foshan University, Foshan 528000, China.ORCID 0000-0003-4143-3606
Foshan University · CNGladstone Institutes · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Since its successful isolation in China in 1995, the porcine reproductive and respiratory syndrome virus (PRRSV) has been mutating into highly pathogenic strains by constantly changing pathogenicity and genetic makeup. In this study, we investigated the prevalence and genetic variation of nonstructural protein 1 (NSP1) in PRRSV-2, the main strain prevalent in China. After formulating hypotheses regarding the biology of the NSP1 protein, the nucleotide and amino acid similarity of NSP1 were analyzed and compared in 193 PRRSV-2 strains. The results showed that NSP1 has a stable hydrophobic protein with a molecular weight of 43,060.76 Da. Although NSP1 lacked signal peptides, it could regulate host cell signaling. Furthermore, NSP1 of different strains had high nucleotide (79.6-100%) and amino acid similarity (78.6-100%). In the amino acid sequence comparison of 15 representative strains of PRRSV-2, multiple amino acid substitution sites were found in NSP1. Phylogenetic tree analysis showed that lineages 1 and 8 had different evolutionary branches with long genetic distances. This study lays the foundation for an in-depth understanding of the nature and genetic variation of NSP1 and the development of a safe and effective vaccine in the future.

Indexed as

Porcine Reproductive and Respiratory SyndromePorcine respiratory and reproductive syndrome virusViral Nonstructural ProteinsAmino Acid SequenceAnimalsNucleotidesPhylogenySwineNsp1a protein, Porcine Reproductive and Respiratory Syndrome VirusNucleotidesViral Nonstructural ProteinsNSP1porcine reproductive and respiratory syndromeporcine reproductive and respiratory syndrome virusvariations

Identifiers

PMID37510339
PMCPMC10379836
OpenAlexW4384130990

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.