Evidence map›Paper›PMID 37511271›Full record

ArticleInternational journal of molecular sciences2023

The Modulation of Sucrose Nonfermenting 1-Related Protein Kinase 2.6 State by Persulfidation and Phosphorylation: Insights from Molecular Dynamics Simulations.

Miaomiao Li, Ting Wu, Shuhan Wang, Tianqi Duan, Siqi Huang, Yanjie Xie

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Advances in Molecular Plant Sciences.International journal of molecular sciences · 2024
    Article
  5. Review
  6. Identification and Characterization of theInternational journal of molecular sciences · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Miaomiao LiCollege of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China.ORCID 0000-0001-7400-7377
Ting WuCollege of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China.
Shuhan WangCollege of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China.
Tianqi DuanCollege of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China.
Siqi HuangInstitute of Bast Fiber Crops (IBFC), Chinese Academy of Agricultural Sciences (CAAS), Changsha 410205, China.
Yanjie XieCollege of Life Sciences, Nanjing Agricultural University, Nanjing 210095, China.ORCID 0000-0002-3503-1267

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

SnRK2.6 (SUCROSE NONFERMENTING 1-RELATED PROTEIN KINASE2.6) has been characterized as a molecular switch for the intracellular abscisic acid (ABA) signal-transduction pathway. Normally, SnRK2.6 is kept in an "off" state, forming a binary complex with protein phosphatase type 2Cs (PP2Cs). Upon stressful conditions, SnRK2.6 turns into an "on" state by its release from PP2Cs and then phosphorylation at Ser175. However, how the "on" and "off" states for SnRK2.6 are fine-tuned, thereby controlling the initiation and braking processes of ABA signaling, is still largely unclear. SnRK2.6 activity was tightly regulated through protein post-translational modifications (PTM), such as persulfidation and phosphorylation. Taking advantage of molecular dynamics simulations, our results showed that Cys131/137 persulfidation on SnRK2.6 induces destabilized binding and weakened interactions between SnRK2.6 and HAB1 (HYPERSENSITIVE TO ABA1), an important PP2C family protein. This unfavorable effect on the association of the SnRK2.6-HAB1 complex suggests that persulfidation functions are a positive regulator of ABA signaling initiation. In addition, Ser267 phosphorylation in persulfidated SnRK2.6 renders a stable physical association between SnRK2.6 and HAB1, a key characterization for SnRK2.6 inhibition. Rather than Ser175, HAB1 cannot dephosphorylate Ser267 in SnRK2.6, which implies that the retained phosphorylation status of Ser267 could ensure that the activated SnRK2.6 reforms the binary complex to cease ABA signaling. Taken together, our findings expand current knowledge concerning the regulation of persulfidation and phosphorylation on the state transition of SnRK2.6 and provide insights into the fine-tuned mechanism of ABA signaling.

Indexed as

ArabidopsisArabidopsis ProteinsAbscisic AcidGene Expression Regulation, PlantMolecular Dynamics SimulationPhosphorylationSucroseAbscisic AcidArabidopsis ProteinsSucroseABAhydrogen sulfidemolecular dynamics simulationpersulfidationphosphorylationSnRK2.6

Identifiers

PMID37511271
PMCPMC10380758

What Socratic holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.