Evidence map›Paper›PMID 37511649›Full record

ArticleJournal of personalized medicine2023

Characterisation of Cartilage Damage via Fusing Mid-Infrared, Near-Infrared, and Raman Spectroscopic Data.

Rubina Shaikh, Valeria Tafintseva, Ervin Nippolainen, Vesa Virtanen, Johanne Solheim, Boris Zimmermann, Simo Saarakkala, Juha Töyräs, Achim Kohler, Isaac O Afara

Open access · goldAbstract read
In one paragraph

Article in Journal of personalized medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed, 1 pooled it
1.4field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 1 synthesis or guideline pooled it, 4 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 4 countries.

Rubina ShaikhDepartment of Technical Physics, University of Eastern Finland, 70211 Kuopio, Finland.
Valeria TafintsevaFaculty of Science and Technology, Norwegian University of Life Sciences, 1432 Ås, Norway.ORCID 0000-0001-6015-0893
Ervin NippolainenDepartment of Technical Physics, University of Eastern Finland, 70211 Kuopio, Finland.
Vesa VirtanenResearch Unit of Medical Imaging, Physics and Technology, University of Oulu, 90570 Oulu, Finland.
Johanne SolheimFaculty of Science and Technology, Norwegian University of Life Sciences, 1432 Ås, Norway.
Boris ZimmermannFaculty of Science and Technology, Norwegian University of Life Sciences, 1432 Ås, Norway.ORCID 0000-0001-5046-520X
Simo SaarakkalaResearch Unit of Medical Imaging, Physics and Technology, University of Oulu, 90570 Oulu, Finland.ORCID 0000-0003-2850-5484
Juha TöyräsDepartment of Technical Physics, University of Eastern Finland, 70211 Kuopio, Finland.
Achim KohlerFaculty of Science and Technology, Norwegian University of Life Sciences, 1432 Ås, Norway.
Isaac O AfaraDepartment of Technical Physics, University of Eastern Finland, 70211 Kuopio, Finland.
Norwegian University of Life Sciences · NOThe University of Queensland · AUUniversity of Eastern Finland · FIUniversity of Oulu · FI

Funding

Finnish Cultural Foundation 65211977 North Savo Regional FundHorizon 2020 grant agreement 780598Kuopio University Hospital VTR project 5203111 & 5203127
6 · The paper itself

Abstract

Mid-infrared spectroscopy (MIR), near-infrared spectroscopy (NIR), and Raman spectroscopy are all well-established analytical techniques in biomedical applications. Since they provide complementary chemical information, we aimed to determine whether combining them amplifies their strengths and mitigates their weaknesses. This study investigates the feasibility of the fusion of MIR, NIR, and Raman spectroscopic data for characterising articular cartilage integrity. Osteochondral specimens from bovine patellae were subjected to mechanical and enzymatic damage, and then MIR, NIR, and Raman data were acquired from the damaged and control specimens. We assessed the capacity of individual spectroscopic methods to classify the samples into damage or control groups using Partial Least Squares Discriminant Analysis (PLS-DA). Multi-block PLS-DA was carried out to assess the potential of data fusion by combining the dataset by applying two-block (MIR and NIR, MIR and Raman, NIR and Raman) and three-block approaches (MIR, NIR, and Raman). The results of the one-block models show a higher classification accuracy for NIR (93%) and MIR (92%) than for Raman (76%) spectroscopy. In contrast, we observed the highest classification efficiency of 94% and 93% for the two-block (MIR and NIR) and three-block models, respectively. The detailed correlative analysis of the spectral features contributing to the discrimination in the three-block models adds considerably more insight into the molecular origin of cartilage damage.

Indexed as

articular cartilagedata fusionpartial least squares discriminant analysispost-traumatic osteoarthritis

Identifiers

PMID37511649
PMCPMC10381453
OpenAlexW4382063069

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.