Evidence map›Paper›PMID 37516995›Full record

ArticleBrain : a journal of neurology2023

Neuromuscular disease genetics in under-represented populations: increasing data diversity.

Lindsay A Wilson, William L Macken, Luke D Perry, Christopher J Record, Katherine R Schon, Rodrigo S S Frezatti, Sharika Raga, Kireshnee Naidu, Özlem Yayıcı Köken, Ipek Polat and 72 more

Abstract read
In one paragraph

Article in Brain : a journal of neurology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

82 authors.

Lindsay A WilsonDepartment of Neuromuscular Diseases, UCL Queen Square Institute of Neurology and The National Hospital for Neurology and Neurosurgery, London WC1N 3BG, UK.ORCID 0009-0001-9396-5893
William L MackenDepartment of Neuromuscular Diseases, UCL Queen Square Institute of Neurology and The National Hospital for Neurology and Neurosurgery, London WC1N 3BG, UK.ORCID 0000-0003-0612-5819
Luke D PerryInstitute of Child Health and Centre for Neuromuscular Diseases, Neurosciences Unit, The Dubowitz Neuromuscular Centre, University College London, UCL Great Ormond Street, Great Ormond Street Hospital, London WC1N 3JH, UK.
Christopher J RecordDepartment of Neuromuscular Diseases, UCL Queen Square Institute of Neurology and The National Hospital for Neurology and Neurosurgery, London WC1N 3BG, UK.ORCID 0000-0002-9802-2683
Katherine R SchonDepartment of Clinical Neurosciences, University of Cambridge, Cambridge CB2 0QQ, UK.ORCID 0000-0001-8054-8954
Rodrigo S S FrezattiDepartment of Neurosciences, School of Medicine of Ribeirão Preto, University of São Paulo, São Paulo, Brazil.ORCID 0000-0003-4325-3414
Sharika RagaNeuroscience Institute, University of Cape Town, Cape Town, South Africa.ORCID 0000-0003-0951-5134
Kireshnee NaiduNeurology Research Group, Division of Neurology, Department of Medicine, University of Cape Town, Cape Town, South Africa.ORCID 0009-0007-2302-4901
Özlem Yayıcı KökenFaculty of Medicine, Department of Pediatric Neurology, Akdeniz University, Antalya, Turkey.
Ipek PolatFaculty of Medicine, Pediatric Neurology Department, Dokuz Eylül University, Izmir, Turkey.
Musambo M KapapaDepartment of Physiotherapy, University of Zambia School of Health Sciences & University Teaching Hospital Neurology Research Office, Lusaka, Zambia.
Natalia DominikDepartment of Neuromuscular Diseases, UCL Queen Square Institute of Neurology and The National Hospital for Neurology and Neurosurgery, London WC1N 3BG, UK.
Stephanie EfthymiouDepartment of Neuromuscular Diseases, UCL Queen Square Institute of Neurology and The National Hospital for Neurology and Neurosurgery, London WC1N 3BG, UK.ORCID 0000-0003-4900-9877
Heba MorsyDepartment of Neuromuscular Diseases, UCL Queen Square Institute of Neurology and The National Hospital for Neurology and Neurosurgery, London WC1N 3BG, UK.ORCID 0000-0002-9047-0959
Melissa NelNeuroscience Institute, University of Cape Town, Cape Town, South Africa.
Mahmoud R FassadWellcome Centre for Mitochondrial Research, Translational and Clinical Research Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne NE2 4HH, UK.ORCID 0000-0003-2568-8326
Fei GaoDepartment of Clinical Neurosciences, University of Cambridge, Cambridge CB2 0QQ, UK.
Krutik PatelWellcome Centre for Mitochondrial Research, Translational and Clinical Research Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne NE2 4HH, UK.
Maryke SchoonenFocus Area for Human Metabolomics, North-West University, Potchefstroom, South Africa.
Michelle BisschoffFocus Area for Human Metabolomics, North-West University, Potchefstroom, South Africa.
Armand VorsterFocus Area for Human Metabolomics, North-West University, Potchefstroom, South Africa.ORCID 0000-0002-7273-4199
Hallgeir JonvikDepartment of Neuromuscular Diseases, UCL Queen Square Institute of Neurology and The National Hospital for Neurology and Neurosurgery, London WC1N 3BG, UK.
Ronel HumanDepartment of Paediatrics, Steve Biko Academic Hospital, University of Pretoria, Pretoria, South Africa.
Elsa LubbeDepartment of Paediatrics, Steve Biko Academic Hospital, University of Pretoria, Pretoria, South Africa.
Malebo NonyaneDepartment of Paediatrics, Steve Biko Academic Hospital, University of Pretoria, Pretoria, South Africa.
Seena VengalilDepartment of Neurology, National Institute of Mental Health and Neurosciences (NIMHANS), Bengaluru, India.
Saraswati NashiDepartment of Neurology, National Institute of Mental Health and Neurosciences (NIMHANS), Bengaluru, India.
Kosha SrivastavaDepartment of Neurology, National Institute of Mental Health and Neurosciences (NIMHANS), Bengaluru, India.ORCID 0009-0001-7135-520X
Richard J L F LemmersDepartment of Human Genetics, Leiden University Medical Center (LUMC), Leiden, The Netherlands.ORCID 0000-0002-7102-710X
Alisha ReyazDepartment of Neurology, All India Institute of Medical Sciences (AIIMS), Delhi, India.
Rinkle MishraDepartment of Neurology, All India Institute of Medical Sciences (AIIMS), Delhi, India.
Ana TöpfJohn Walton Muscular Dystrophy Research Centre, Newcastle University Translational and Clinical Research Institute and Newcastle Hospitals NHS Foundation Trust, Newcastle upon Tyne, UK.
Christina I TrainorJohn Walton Muscular Dystrophy Research Centre, Newcastle University Translational and Clinical Research Institute and Newcastle Hospitals NHS Foundation Trust, Newcastle upon Tyne, UK.
Elizabeth C SteynNeurology Research Group, Division of Neurology, Department of Medicine, University of Cape Town, Cape Town, South Africa.
Amokelani C MahunguNeuroscience Institute, University of Cape Town, Cape Town, South Africa.
Patrick J van der VlietDepartment of Human Genetics, Leiden University Medical Center (LUMC), Leiden, The Netherlands.
Ahmet Cevdet CeylanDepartment of Medical Genetics, Ankara Bilkent City Hospital, Ankara, Turkey.
A Semra HizFaculty of Medicine, Pediatric Neurology Department, Dokuz Eylül University, Izmir, Turkey.ORCID 0000-0002-8020-4884
Büşranur ÇavdarlıDepartment of Medical Genetics, Ankara Bilkent City Hospital, Ankara, Turkey.
C Nur Semerci GündüzDepartment of Medical Genetics, Ankara Bilkent City Hospital, Ankara, Turkey.ORCID 0000-0001-5287-8526
Gülay Güleç CeylanDepartment of Medical Genetics, Ankara Bilkent City Hospital, Ankara, Turkey.ORCID 0000-0002-7825-8808
Madhu NagappaDepartment of Neurology, National Institute of Mental Health and Neurosciences (NIMHANS), Bengaluru, India.
Karthik B TallapakaCSIR-Centre for Cellular and Molecular Biology (CCMB), Hyderabad, Telangana, India.ORCID 0000-0003-0386-2266
Periyasamy GovindarajDiagnostics Division, Centre for DNA Fingerprinting and Diagnostics, Hyderabad, Telangana, India.
Silvère M van der MaarelDepartment of Human Genetics, Leiden University Medical Center (LUMC), Leiden, The Netherlands.
Gayathri NarayanappaDepartment of Neuropathology, National Institute of Mental Health and Neurosciences (NIMHANS), Bengaluru, India.
Bevinahalli N NandeeshDepartment of Neuropathology, National Institute of Mental Health and Neurosciences (NIMHANS), Bengaluru, India.
Somwe Wa SomweDepartment of Clinical Sciences, School of Medicine and Health Sciences, University of Lusaka, Lusaka, Zambia.
David R BeardenUniversity of Zambia Department of Educational Psychology, Lusaka, Zambia.ORCID 0000-0001-9488-0683
Michelle P KvalsundDepartment of Neurology, School of Medicine and Dentistry, University of Rochester Medical Center, Rochester, NY 14642, USA.ORCID 0000-0003-2519-4529
Gita M RamdharryDepartment of Neuromuscular Diseases, UCL Queen Square Institute of Neurology and The National Hospital for Neurology and Neurosurgery, London WC1N 3BG, UK.ORCID 0000-0001-9344-0301
Yavuz OktayIzmir International Biomedicine and Genome Institute, Dokuz Eylül University, Izmir, Turkey.ORCID 0000-0002-0158-2693
Uluç YişFaculty of Medicine, Pediatric Neurology Department, Dokuz Eylül University, Izmir, Turkey.
Haluk TopaloğluYeditepe University Hospitals, Istanbul, Turkey.
Anna SarkozyNIHR Great Ormond Street Hospital Biomedical Research Centre, UCL Great Ormond Street Institute of Child Health, University College London, London WC1N 1EH, UK.
Enrico BugiardiniDepartment of Neuromuscular Diseases, UCL Queen Square Institute of Neurology and The National Hospital for Neurology and Neurosurgery, London WC1N 3BG, UK.ORCID 0000-0002-9709-6699
Franclo HenningDivision of Neurology, Department of Medicine, Stellenbosch University, Cape Town, South Africa.ORCID 0000-0002-4006-8101
Jo M WilmshurstNeuroscience Institute, University of Cape Town, Cape Town, South Africa.ORCID 0000-0001-7328-1796
Jeannine M HeckmannNeuroscience Institute, University of Cape Town, Cape Town, South Africa.ORCID 0000-0002-8999-718X
Robert McFarlandWellcome Centre for Mitochondrial Research, Translational and Clinical Research Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne NE2 4HH, UK.
Robert W TaylorWellcome Centre for Mitochondrial Research, Translational and Clinical Research Institute, Faculty of Medical Sciences, Newcastle University, Newcastle upon Tyne NE2 4HH, UK.
Izelle SmutsDepartment of Paediatrics, Steve Biko Academic Hospital, University of Pretoria, Pretoria, South Africa.
Francois H van der WesthuizenFocus Area for Human Metabolomics, North-West University, Potchefstroom, South Africa.ORCID 0000-0002-7879-1776
Claudia Ferreira da Rosa SobreiraDepartment of Neurosciences, School of Medicine of Ribeirão Preto, University of São Paulo, São Paulo, Brazil.ORCID 0000-0002-7420-1644
Pedro J TomaselliDepartment of Neurosciences, School of Medicine of Ribeirão Preto, University of São Paulo, São Paulo, Brazil.ORCID 0000-0002-1485-3771
Wilson MarquesDepartment of Neurosciences, School of Medicine of Ribeirão Preto, University of São Paulo, São Paulo, Brazil.
Rohit BhatiaDepartment of Neurology, All India Institute of Medical Sciences (AIIMS), Delhi, India.ORCID 0000-0001-7662-3202
Ashwin DalalDiagnostics Division, Centre for DNA Fingerprinting and Diagnostics, Hyderabad, Telangana, India.ORCID 0000-0001-5929-745X
M V Padma SrivastavaDepartment of Neurology, All India Institute of Medical Sciences (AIIMS), Delhi, India.
Sireesha YareedaDepartment of Neurology, Nizam's Institute of Medical Sciences (NIMS), Hyderabad, Telangana, India.
Atchayaram NaliniDepartment of Neurology, National Institute of Mental Health and Neurosciences (NIMHANS), Bengaluru, India.ORCID 0000-0001-9791-3639
Venugopalan Y VishnuDepartment of Neurology, All India Institute of Medical Sciences (AIIMS), Delhi, India.ORCID 0000-0002-3654-8137
Kumarasamy ThangarajCSIR-Centre for Cellular and Molecular Biology (CCMB), Hyderabad, Telangana, India.ORCID 0000-0002-0075-0106
Volker StraubJohn Walton Muscular Dystrophy Research Centre, Newcastle University Translational and Clinical Research Institute and Newcastle Hospitals NHS Foundation Trust, Newcastle upon Tyne, UK.
Rita HorvathDepartment of Clinical Neurosciences, University of Cambridge, Cambridge CB2 0QQ, UK.ORCID 0000-0002-9841-170X
Patrick F ChinneryDepartment of Clinical Neurosciences, University of Cambridge, Cambridge CB2 0QQ, UK.ORCID 0000-0002-7065-6617
Robert D S PitceathlyDepartment of Neuromuscular Diseases, UCL Queen Square Institute of Neurology and The National Hospital for Neurology and Neurosurgery, London WC1N 3BG, UK.ORCID 0000-0002-6123-4551
Francesco MuntoniInstitute of Child Health and Centre for Neuromuscular Diseases, Neurosciences Unit, The Dubowitz Neuromuscular Centre, University College London, UCL Great Ormond Street, Great Ormond Street Hospital, London WC1N 3JH, UK.
Henry HouldenDepartment of Neuromuscular Diseases, UCL Queen Square Institute of Neurology and The National Hospital for Neurology and Neurosurgery, London WC1N 3BG, UK.ORCID 0000-0002-2866-7777
Jana VandrovcovaDepartment of Neuromuscular Diseases, UCL Queen Square Institute of Neurology and The National Hospital for Neurology and Neurosurgery, London WC1N 3BG, UK.ORCID 0000-0001-9508-0477
Mary M ReillyDepartment of Neuromuscular Diseases, UCL Queen Square Institute of Neurology and The National Hospital for Neurology and Neurosurgery, London WC1N 3BG, UK.ORCID 0000-0003-0686-905X
Michael G HannaDepartment of Neuromuscular Diseases, UCL Queen Square Institute of Neurology and The National Hospital for Neurology and Neurosurgery, London WC1N 3BG, UK.

Funding

trainingU54NS065712 · NINDS · WAYNE STATE UNIVERSITY · PI SHY, MICHAEL E. · 2009 to 2023
$19.6M
Longitudinal Cognitive Outcomes in Children and Adolescents with HIV in ZambiaK23NS117310 · NINDS · UNIVERSITY OF ROCHESTER · PI BEARDEN, DAVID ROSS · 2020 to 2024
$1.0M
Community Health and Neuropathy: Nutritional and Environmental Links in Zambia (CHANNELZ)K23NS112463 · NINDS · UNIVERSITY OF ROCHESTER · PI KVALSUND, MICHELLE POWELL · 2020 to 2024
$925k
Alzheimer's SocietyMedical Research Council MR/S005021/1NINDS NIH HHS 1K23NS112463NINDS NIH HHS K23 NS112463NINDS NIH HHS K23 NS117310NINDS NIH HHS U54 NS065712Wellcome Trust
6 · The paper itself

Abstract

Neuromuscular diseases (NMDs) affect ∼15 million people globally. In high income settings DNA-based diagnosis has transformed care pathways and led to gene-specific therapies. However, most affected families are in low-to-middle income countries (LMICs) with limited access to DNA-based diagnosis. Most (86%) published genetic data is derived from European ancestry. This marked genetic data inequality hampers understanding of genetic diversity and hinders accurate genetic diagnosis in all income settings. We developed a cloud-based transcontinental partnership to build diverse, deeply-phenotyped and genetically characterized cohorts to improve genetic architecture knowledge, and potentially advance diagnosis and clinical management. We connected 18 centres in Brazil, India, South Africa, Turkey, Zambia, Netherlands and the UK. We co-developed a cloud-based data solution and trained 17 international neurology fellows in clinical genomic data interpretation. Single gene and whole exome data were analysed via a bespoke bioinformatics pipeline and reviewed alongside clinical and phenotypic data in global webinars to inform genetic outcome decisions. We recruited 6001 participants in the first 43 months. Initial genetic analyses 'solved' or 'possibly solved' ∼56% probands overall. In-depth genetic data review of the four commonest clinical categories (limb girdle muscular dystrophy, inherited peripheral neuropathies, congenital myopathy/muscular dystrophies and Duchenne/Becker muscular dystrophy) delivered a ∼59% 'solved' and ∼13% 'possibly solved' outcome. Almost 29% of disease causing variants were novel, increasing diverse pathogenic variant knowledge. Unsolved participants represent a new discovery cohort. The dataset provides a large resource from under-represented populations for genetic and translational research. In conclusion, we established a remote transcontinental partnership to assess genetic architecture of NMDs across diverse populations. It supported DNA-based diagnosis, potentially enabling genetic counselling, care pathways and eligibility for gene-specific trials. Similar virtual partnerships could be adopted by other areas of global genomic neurological practice to reduce genetic data inequality and benefit patients globally.

Indexed as

Muscular DystrophiesMuscular Dystrophies, Limb-GirdleNeuromuscular DiseasesPeripheral Nervous System DiseasesDNAHumansDNAcapacity buildingequality and diversitygenomic medicineinherited neuromuscular diseaselow-to-middle income country

Identifiers

PMID37516995
PMCPMC10690022

What Socratic holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.