Evidence map›Paper›PMID 37523254›Full record

ArticleMedical physics2024

Graphical modeling of causal factors associated with the postoperative survival of esophageal cancer subjects.

Shangsi Ren, Cameron A Beeche, Kartik Iyer, Zhiyi Shi, Quentin Auster, James M Hawkins, Joseph K Leader, Rajeev Dhupar, Jiantao Pu

Open access · bronzeAbstract read
In one paragraph

Article in Medical physics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
1.1field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 5 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 1 institution in 1 country.

Shangsi RenDepartment of Radiology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Cameron A BeecheDepartment of Radiology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Kartik IyerDepartment of Radiology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Zhiyi ShiDepartment of Radiology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Quentin AusterDepartment of Radiology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
James M HawkinsDepartment of Radiology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Joseph K LeaderDepartment of Radiology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Rajeev DhuparDepartment of Cardiothoracic Surgery, Division of Thoracic and Foregut Surgery, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Jiantao PuDepartment of Radiology, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
University of Pittsburgh · US

Funding

VECTOR CORE FACILITYP30CA047904 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI Dan Paul Zandberg · 1988 to 2026
$158.0M
Clinical Validation Center for Lung Cancer Early DetectionU01CA271888 · NCI · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI HANASH, SAMIR M · 2022 to 2025
$4.9M
Macro-vasculature: A Novel Image Biomarker of Lung CancerR01CA237277 · NCI · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI PU, JIANTAO · 2020 to 2024
$2.8M
Development and Validation of a Multimodal Ultrasound- Based Biomarker for Myofascial PainR61AT012282 · NCCIH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI KIM, KANG, PU, JIANTAO · 2022 to 2022
$2.2M
NCCIH NIH HHS R61 AT012282NCI NIH HHS P30 CA047904NCI NIH HHS R01 CA237277NCI NIH HHS U01 CA271888NIH HHS P30CA047904NIH HHS R01CA237277NIH HHS R61AT012282NIH HHS U01CA271888
6 · The paper itself

Abstract

purposeTo clarify the causal relationship between factors contributing to the postoperative survival of patients with esophageal cancer.

methodsA cohort of 195 patients who underwent surgery for esophageal cancer between 2008 and 2021 was used in the study. All patients had preoperative chest computed tomography (CT) and positron emission tomography-CT (PET-CT) scans prior to receiving any treatment. From these images, high throughput and quantitative radiomic features, tumor features, and various body composition features were automatically extracted. Causal relationships among these image features, patient demographics, and other clinicopathological variables were analyzed and visualized using a novel score-based directed graph called "Grouped Greedy Equivalence Search" (GGES) while taking prior knowledge into consideration. After supplementing and screening the causal variables, the intervention do-calculus adjustment (IDA) scores were calculated to determine the degree of impact of each variable on survival. Based on this IDA score, a GGES prediction formula was generated. Ten-fold cross-validation was used to assess the performance of the models. The prediction results were evaluated using the R-Squared Score (R

resultsThe final causal graphical model was formed by two PET-based image variables, ten body composition variables, four pathological variables, four demographic variables, two tumor variables, and one radiological variable (Percentile 10). Intramuscular fat mass was found to have the most impact on overall survival month. Percentile 10 and overall TNM (T: tumor, N: nodes, M: metastasis) stage were identified as direct causes of overall survival (month). The GGES casual model outperformed GES in regression prediction (R

conclusionThe GGES causal model can provide a reliable and straightforward representation of the intricate causal relationships among the variables that impact the postoperative survival of patients with esophageal cancer.

Indexed as

Esophageal NeoplasmsPositron Emission Tomography Computed TomographyFluorodeoxyglucose F18HumansPositron-Emission TomographyRetrospective StudiesTomography, X-Ray ComputedFluorodeoxyglucose F18causal discoveryesophageal cancergreedy equivalence searchsurvival analysis

Identifiers

PMID37523254
PMCPMC10828112
OpenAlexW4385415819

What Socratic holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.