Evidence mapPaperPMID 37529379Full record

ArticleFrontiers in molecular biosciences2023

Aberrations in ion channels interacting with lipid metabolism and epithelial-mesenchymal transition in esophageal squamous cell carcinoma.

K T Shreya Parthasarathi, Susmita Mandal, John Philip George, Kiran Bharat Gaikwad, Sruthi Sasidharan, Seetaramanjaneyulu Gundimeda, Mohit Kumar Jolly, Akhilesh Pandey, Jyoti Sharma

Open access · goldAbstract read
In one paragraph

Article in Frontiers in molecular biosciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
1.5field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 10 citations in OpenAlex.

  1. IntratumorGut microbes · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

K T Shreya ParthasarathiInstitute of Bioinformatics, International Technology Park, Bangalore, India.
Susmita MandalCenter for BioSystems Science and Engineering, Indian Institute of Science, Bangalore, India.
John Philip GeorgeInstitute of Bioinformatics, International Technology Park, Bangalore, India.
Kiran Bharat GaikwadInstitute of Bioinformatics, International Technology Park, Bangalore, India.
Sruthi SasidharanInstitute of Bioinformatics, International Technology Park, Bangalore, India.
Seetaramanjaneyulu GundimedaInstitute of Bioinformatics, International Technology Park, Bangalore, India.
Mohit Kumar JollyCenter for BioSystems Science and Engineering, Indian Institute of Science, Bangalore, India.
Akhilesh PandeyDepartment of Laboratory Medicine and Pathology, Rochester, MN, United States.
Jyoti SharmaInstitute of Bioinformatics, International Technology Park, Bangalore, India.
Institute of Bioinformatics · INIndian Institute of Science Bangalore · INManipal Academy of Higher Education · INNational Institute of Mental Health and Neurosciences · IN

Funding

Wellcome Trust
6 · The paper itself

Abstract

Esophageal squamous cell carcinoma (ESCC) is the most prevalent malignant gastrointestinal tumor. Ion channels contribute to tumor growth and progression through interactions with their neighboring molecules including lipids. The dysregulation of membrane ion channels and lipid metabolism may contribute to the epithelial-mesenchymal transition (EMT), leading to metastatic progression. Herein, transcriptome profiles of patients with ESCC were analyzed by performing differential gene expression and weighted gene co-expression network analysis to identify the altered ion channels, lipid metabolism- and EMT-related genes in ESCC. A total of 1,081 differentially expressed genes, including 113 ion channels, 487 lipid metabolism-related, and 537 EMT-related genes, were identified in patients with ESCC. Thereafter, EMT scores were correlated with altered co-expressed genes. The altered co-expressed genes indicated a correlation with EMT signatures. Interactions among 22 ion channels with 3 hub lipid metabolism- and 13 hub EMT-related proteins were determined using protein-protein interaction networks. A pathway map was generated to depict deregulated signaling pathways including insulin resistance and the estrogen receptor-Ca

Indexed as

esophageal cancerfatty acidsinteraction networksmembrane proteinsRNA-seq

Identifiers

PMID37529379
PMCPMC10388552
OpenAlexW4384484668

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.