Evidence map›Paper›PMID 37532690›Full record

ArticleNature communications2023

Deterministic early endosomal maturations emerge from a stochastic trigger-and-convert mechanism.

Harrison M York, Kunaal Joshi, Charles S Wright, Laura Z Kreplin, Samuel J Rodgers, Ullhas K Moorthi, Hetvi Gandhi, Abhishek Patil, Christina A Mitchell, Srividya Iyer-Biswas and 1 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 21 citations in OpenAlex.

  1. Review
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  7. Diffusive spreading across dynamic mitochondrial network architectures.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  8. The Rab5 effector Rabankyrin-5 mediates endosomal fusion and trafficking of human papillomavirus during early entry.Proceedings of the National Academy of Sciences of the United States of America · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Harrison M York *Monash Biomedicine Discovery Institute, Faculty of Medicine, Nursing and Health Sciences, Monash University, Clayton/Melbourne, VIC, 3800, Australia. harrison.york@monash.edu.ORCID 0000-0002-4534-8188
Kunaal Joshi *Department of Physics and Astronomy, Purdue University, West Lafayette, IN, 47907, USA.ORCID 0000-0002-8001-1230
Charles S Wright *Department of Physics and Astronomy, Purdue University, West Lafayette, IN, 47907, USA.ORCID 0000-0003-4268-3965
Laura Z KreplinMonash Biomedicine Discovery Institute, Faculty of Medicine, Nursing and Health Sciences, Monash University, Clayton/Melbourne, VIC, 3800, Australia.ORCID 0009-0008-1352-9911
Samuel J RodgersDepartment of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, Monash University, Clayton/Melbourne, VIC, 3800, Australia.ORCID 0000-0002-7186-8355
Ullhas K MoorthiMonash Biomedicine Discovery Institute, Faculty of Medicine, Nursing and Health Sciences, Monash University, Clayton/Melbourne, VIC, 3800, Australia.
Hetvi GandhiMonash Biomedicine Discovery Institute, Faculty of Medicine, Nursing and Health Sciences, Monash University, Clayton/Melbourne, VIC, 3800, Australia.
Abhishek PatilMonash Biomedicine Discovery Institute, Faculty of Medicine, Nursing and Health Sciences, Monash University, Clayton/Melbourne, VIC, 3800, Australia.ORCID 0000-0002-1087-3839
Christina A MitchellDepartment of Biochemistry and Molecular Biology, Biomedicine Discovery Institute, Monash University, Clayton/Melbourne, VIC, 3800, Australia.ORCID 0000-0001-9372-3192
Srividya Iyer-BiswasDepartment of Physics and Astronomy, Purdue University, West Lafayette, IN, 47907, USA. iyerbiswas@purdue.edu.ORCID 0000-0002-1587-6780
Senthil ArumugamMonash Biomedicine Discovery Institute, Faculty of Medicine, Nursing and Health Sciences, Monash University, Clayton/Melbourne, VIC, 3800, Australia. senthil.arumugam@monash.edu.ORCID 0000-0001-6733-4679
Monash University · AUAustralian Regenerative Medicine Institute · AUDiscovery Institute · USPurdue University West Lafayette · USSanta Fe Institute · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Endosomal maturation is critical for robust and timely cargo transport to specific cellular compartments. The most prominent model of early endosomal maturation involves a phosphoinositide-driven gain or loss of specific proteins on individual endosomes, emphasising an autonomous and stochastic description. However, limitations in fast, volumetric imaging long hindered direct whole cell-level measurements of absolute numbers of maturation events. Here, we use lattice light-sheet imaging and bespoke automated analysis to track individual very early (APPL1-positive) and early (EEA1-positive) endosomes over the entire population, demonstrating that direct inter-endosomal contact drives maturation between these populations. Using fluorescence lifetime, we show that this endosomal interaction is underpinned by asymmetric binding of EEA1 to very early and early endosomes through its N- and C-termini, respectively. In combination with agent-based simulation which supports a 'trigger-and-convert' model, our findings indicate that APPL1- to EEA1-positive maturation is driven not by autonomous events but by heterotypic EEA1-mediated interactions, providing a mechanism for temporal and population-level control of maturation.

Indexed as

Transport VesiclesVesicular Transport ProteinsEndosomesVesicular Transport Proteins

Identifiers

PMID37532690
PMCPMC10397212
OpenAlexW4385487393

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.