Evidence map›Paper›PMID 37533187›Full record

ReviewGenes, brain, and behavior2023

5. Collaborative Study on the Genetics of Alcoholism: Functional genomics.

Isabel Gameiro-Ros, Dina Popova, Iya Prytkova, Zhiping P Pang, Yunlong Liu, Danielle Dick, Kathleen K Bucholz, Arpana Agrawal, Bernice Porjesz, Alison M Goate and 7 more

Open access · hybridAbstract readReview
In one paragraph

Review in Genes, brain, and behavior, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 5 citations in OpenAlex.

  1. Pleiotropic Effects ofBiomolecules · 2025
    Review
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 6 institutions in 1 country.

Isabel Gameiro-RosNash Family Department of Neuroscience, Icahn School of Medicine at Mount Sinai, New York, New York, USA.ORCID 0000-0002-8286-2928
Dina PopovaHuman Genetics Institute of New Jersey, Rutgers University, Piscataway, New Jersey, USA.
Iya PrytkovaNash Family Department of Neuroscience, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Zhiping P PangHuman Genetics Institute of New Jersey, Rutgers University, Piscataway, New Jersey, USA.
Yunlong LiuDepartment of Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis, Indiana, USA.
Danielle DickRutgers Addiction Research Center, Robert Wood Johnson Medical School, Rutgers University, Piscataway, New Jersey, USA.ORCID 0000-0002-1636-893X
Kathleen K BucholzDepartment of Psychiatry, Washington University School of Medicine, St. Louis, Missouri, USA.ORCID 0000-0003-3794-0736
Arpana AgrawalDepartment of Psychiatry, Washington University School of Medicine, St. Louis, Missouri, USA.ORCID 0000-0002-0313-793X
Bernice PorjeszDepartment of Psychiatry and Behavioral Sciences, SUNY Downstate Health Sciences University, Brooklyn, New York, USA.
Alison M GoateNash Family Department of Neuroscience, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Xiaoling XueiDepartment of Medical and Molecular Genetics, Indiana University School of Medicine, Indianapolis, Indiana, USA.
Chella KamarajanDepartment of Psychiatry and Behavioral Sciences, SUNY Downstate Health Sciences University, Brooklyn, New York, USA.
COGA Collaborators
Jay A TischfieldHuman Genetics Institute of New Jersey, Rutgers University, Piscataway, New Jersey, USA.
Howard J EdenbergDepartment of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, Indiana, USA.
Paul A SlesingerNash Family Department of Neuroscience, Icahn School of Medicine at Mount Sinai, New York, New York, USA.
Ronald P HartHuman Genetics Institute of New Jersey, Rutgers University, Piscataway, New Jersey, USA.
Rutgers, The State University of New Jersey · USIcahn School of Medicine at Mount Sinai · USIndiana University School of MedicineSUNY Downstate Health Sciences University · USWashington University in St. Louis · USIndiana University Indianapolis · US

Funding

Subject CollectionU10AA008401 · NIAAA · SUNY DOWNSTATE MEDICAL CENTER · PI JAY Arnold TISCHFIELD · 1989 to 2026
$162.7M
National Centralized Repository for Alzheimer's Disease and Related Dementias (NCRAD)U24AG021886 · NIA · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI TATIANA M. FOROUD · 2002 to 2026
$119.8M
The NINDS Human Cell and Data Repository (U24 renewal)U24NS095914 · NINDS · RUTGERS, THE STATE UNIV OF N.J. · PI Azadeh Jadali, JAMES A KNOWLES · 2015 to 2026
$15.9M
Brain Tissue Resource Centre for Alcohol ResearchR28AA012725 · NIAAA · UNIVERSITY OF SYDNEY · PI Greg Trevor Sutherland · 2012 to 2026
$7.0M
Structural Analysis of Alcohol-dependent Activation of GIRKsR01AA018734 · NIAAA · SALK INSTITUTE FOR BIOLOGICAL STUDIES · PI Paul A Slesinger · 2010 to 2026
$6.6M
Deciphering the neural basis of alcohol use disorders using human and mouse neuronsR01AA023797 · NIAAA · RUTGERS BIOMEDICAL AND HEALTH SCIENCES · PI ZHIPING P. PANG · 2016 to 2026
$4.8M
Phenotypic analysis of human iPSC carrying addiction-associated gene variantsR21DA032984 · NIDA · RUTGERS, THE STATE UNIV OF N.J. · PI HART, RONALD P, TISCHFIELD, JAY ARNOLD · 2011 to 2012
$425k
Developing an In Vitro Neurocircuitry Model of Addiction using Risk-Associated HuR21DA035594 · NIDA · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI HART, RONALD P, PANG, ZHIPING P. · 2013 to 2014
$409k
High throughput multicompartment culture chambers to develop neurocircuit models of addiction riskR21DA039686 · NIDA · RUTGERS, THE STATE UNIV OF N.J. · PI HART, RONALD P, PANG, ZHIPING P. · 2015 to 2016
$382k
Elucidating the Role of KCNJ6 in a Human Neuronal Model of Alcohol Use DisorderF31AA027949 · NIAAA · ICAHN SCHOOL OF MEDICINE AT MOUNT SINAI · PI PRYTKOVA, IYA · 2019 to 2021
$132k
NIAAA NIH HHS F31 AA027949NIAAA NIH HHS R01 AA018734NIAAA NIH HHS R01 AA023797NIAAA NIH HHS R28 AA012725NIAAA NIH HHS U10 AA008401NIAAA NIH HHS U10AA008401NIA NIH HHS U24 AG021886NIDA NIH HHS R01 AA023797NIDA NIH HHS R21 DA032984NIDA NIH HHS R21 DA035594NIDA NIH HHS R21 DA039686NIH HHS R01 AA023797NINDS NIH HHS U24 NS095914
6 · The paper itself

Abstract

Alcohol Use Disorder is a complex genetic disorder, involving genetic, neural, and environmental factors, and their interactions. The Collaborative Study on the Genetics of Alcoholism (COGA) has been investigating these factors and identified putative alcohol use disorder risk genes through genome-wide association studies. In this review, we describe advances made by COGA in elucidating the functional changes induced by alcohol use disorder risk genes using multimodal approaches with human cell lines and brain tissue. These studies involve investigating gene regulation in lymphoblastoid cells from COGA participants and in post-mortem brain tissues. High throughput reporter assays are being used to identify single nucleotide polymorphisms in which alternate alleles differ in driving gene expression. Specific single nucleotide polymorphisms (both coding or noncoding) have been modeled using induced pluripotent stem cells derived from COGA participants to evaluate the effects of genetic variants on transcriptomics, neuronal excitability, synaptic physiology, and the response to ethanol in human neurons from individuals with and without alcohol use disorder. We provide a perspective on future studies, such as using polygenic risk scores and populations of induced pluripotent stem cell-derived neurons to identify signaling pathways related with responses to alcohol. Starting with genes or loci associated with alcohol use disorder, COGA has demonstrated that integration of multimodal data within COGA participants and functional studies can reveal mechanisms linking genomic variants with alcohol use disorder, and potential targets for future treatments.

Indexed as

AlcoholismAlcohol DrinkingEthanolGenome-Wide Association StudyGenomicsHumansPolymorphism, Single NucleotideEthanolalcohol use disorder (AUD)braingene expressiongenomicsinduced pluripotent stem cellsneuronal function

Identifiers

PMID37533187
PMCPMC10550792
OpenAlexW4385513884

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.