Evidence map›Paper›PMID 37533313›Full record

ArticleMolecular and cellular biology2023

Shared Gene Targets of the ATF4 and p53 Transcriptional Networks.

Gabriele Baniulyte, Serene A Durham, Lauren E Merchant, Morgan A Sammons

Open access · hybridAbstract read
In one paragraph

Article in Molecular and cellular biology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
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  6. Article
  7. Article
  8. Article
  9. Article
  10. Targeting apoptotic pathways for cancer therapy.The Journal of clinical investigation · 2024
    Review
  11. Article
  12. Review
  13. Context dependent activity of p63-bound gene regulatory elements.bioRxiv : the preprint server for biology · 2024
    Article
  14. Review
  15. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Gabriele BaniulyteDepartment of Biological Sciences, The RNA Institute, University at Albany, State University of New York, Albany, New York, USA.ORCID 0000-0003-0235-7938
Serene A DurhamDepartment of Biological Sciences, The RNA Institute, University at Albany, State University of New York, Albany, New York, USA.
Lauren E MerchantDepartment of Biological Sciences, The RNA Institute, University at Albany, State University of New York, Albany, New York, USA.
Morgan A SammonsDepartment of Biological Sciences, The RNA Institute, University at Albany, State University of New York, Albany, New York, USA.ORCID 0000-0002-5329-1169
Albany State University · US

Funding

Defining cis-regulatory networks controlling a core stress responseR35GM138120 · NIGMS · STATE UNIVERSITY OF NEW YORK AT ALBANY · PI SAMMONS, MORGAN ANDREW · 2020 to 2024
$1.8M
NIGMS NIH HHS R35 GM138120
6 · The paper itself

Abstract

The master tumor suppressor p53 regulates multiple cell fate decisions, such as cell cycle arrest and apoptosis, via transcriptional control of a broad gene network. Dysfunction in the p53 network is common in cancer, often through mutations that inactivate p53 or other members of the pathway. Induction of tumor-specific cell death by restoration of p53 activity without off-target effects has gained significant interest in the field. In this study, we explore the gene regulatory mechanisms underlying a putative anticancer strategy involving stimulation of the p53-independent integrated stress response (ISR). Our data demonstrate the p53 and ISR pathways converge to independently regulate common metabolic and proapoptotic genes. We investigated the architecture of multiple gene regulatory elements bound by p53 and the ISR effector ATF4 controlling this shared regulation. We identified additional key transcription factors that control basal and stress-induced regulation of these shared p53 and ATF4 target genes. Thus, our results provide significant new molecular and genetic insight into gene regulatory networks and transcription factors that are the target of numerous antitumor therapies.

Indexed as

Gene Regulatory NetworksTumor Suppressor Protein p53ApoptosisCell Line, TumorGene Expression RegulationTranscription FactorsTranscription FactorsTumor Suppressor Protein p53ATF4cis-regulationenhancersgenomicsp53transcriptiontranscription factors

Identifiers

PMID37533313
PMCPMC10448979
OpenAlexW4385514935

What Socratic holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.