Evidence map›Paper›PMID 37541760›Full record

ArticleGenes & development2023

Delineation of two multi-invasion-induced rearrangement pathways that differently affect genome stability.

Diedre Reitz, Yasmina Djeghmoum, Ruth A Watson, Pallavi Rajput, Juan Lucas Argueso, Wolf-Dietrich Heyer, Aurèle Piazza

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

  1. Mechanisms That Govern Recombinase Fidelity Control During Eukaryotic Homologous Recombination.BioEssays : news and reviews in molecular, cellular and developmental biology · 2026
    Review
  2. Review
  3. Article
  4. Formation of chromosomal rearrangements inbioRxiv : the preprint server for biology · 2025
    Article
  5. Article
  6. Article
  7. Article
  8. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Diedre ReitzDepartment of Microbiology and Molecular Genetics, University of California, Davis, Davis, California 95616, USA.ORCID 0000-0002-7949-8344
Yasmina DjeghmoumLaboratory of Biology and Modelling of the Cell (UMR5239), Ecole Normale Supérieure de Lyon, 69007 Lyon, France.
Ruth A WatsonDepartment of Environmental and Radiological Health Sciences, Colorado State University, Fort Collins, Colorado 80523, USA.
Pallavi RajputDepartment of Microbiology and Molecular Genetics, University of California, Davis, Davis, California 95616, USA.
Juan Lucas ArguesoDepartment of Environmental and Radiological Health Sciences, Colorado State University, Fort Collins, Colorado 80523, USA.ORCID 0000-0002-7157-1519
Wolf-Dietrich HeyerDepartment of Microbiology and Molecular Genetics, University of California, Davis, Davis, California 95616, USA; aurele.piazza@ens-lyon.fr wdheyer@ucdavis.edu.ORCID 0000-0002-7774-1953
Aurèle PiazzaLaboratory of Biology and Modelling of the Cell (UMR5239), Ecole Normale Supérieure de Lyon, 69007 Lyon, France; aurele.piazza@ens-lyon.fr wdheyer@ucdavis.edu.ORCID 0000-0002-7722-0955
University of California, Davis · USColorado State University · USUniversité Claude Bernard Lyon 1 · FR

Funding

Staff InvestigatorsP30CA093373 · NCI · UNIVERSITY OF CALIFORNIA DAVIS · PI Gina M Dayton · 2002 to 2026
$84.9M
RECOMBINATIONAL MECHANISMS OF DNA REPAIR IN EUKARYOTESR01GM058015 · NIGMS · UNIVERSITY OF CALIFORNIA DAVIS · PI HEYER, WOLF-DIETRICH · 2000 to 2025
$8.8M
MinION long-read DNA sequencer system for the analysis of structural genomic variation in yeastR35GM119788 · NIGMS · COLORADO STATE UNIVERSITY · PI ARGUESO, JUAN LUCAS · 2016 to 2025
$3.7M
Training Program in Oncogenic Signals and Chromosome BiologyT32CA108459 · NCI · UNIVERSITY OF CALIFORNIA AT DAVIS · PI HEYER, WOLF-DIETRICH · 2006 to 2020
$3.6M
Genome instability induced by homologous recombinationR01GM137751 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI HEYER, WOLF-DIETRICH · 2020 to 2023
$1.3M
NCI NIH HHS P30 CA093373NCI NIH HHS T32 CA108459NIGMS NIH HHS R01 GM058015NIGMS NIH HHS R01 GM137751NIGMS NIH HHS R35 GM119788
6 · The paper itself

Abstract

Punctuated bursts of structural genomic variations (SVs) have been described in various organisms, but their etiology remains incompletely understood. Homologous recombination (HR) is a template-guided mechanism of repair of DNA double-strand breaks and stalled or collapsed replication forks. We recently identified a DNA break amplification and genome rearrangement pathway originating from the endonucleolytic processing of a multi-invasion (MI) DNA joint molecule formed during HR. Genome-wide approaches confirmed that multi-invasion-induced rearrangement (MIR) frequently leads to several repeat-mediated SVs and aneuploidies. Using molecular and genetic analysis and a novel, highly sensitive proximity ligation-based assay for chromosomal rearrangement quantification, we further delineate two MIR subpathways. MIR1 is a universal pathway occurring in any sequence context, which generates secondary breaks and frequently leads to additional SVs. MIR2 occurs only if recombining donors exhibit substantial homology and results in sequence insertion without additional breaks or SVs. The most detrimental MIR1 pathway occurs late on a subset of persisting DNA joint molecules in a PCNA/Pol

Indexed as

Genomic InstabilityChromosomes, FungalDNAGene RearrangementHomologous RecombinationSaccharomyces cerevisiaeSelection, GeneticDNADNA breakDNA joint moleculesgenomic instabilityhomologous recombinationpolymerase δ

Identifiers

PMID37541760
PMCPMC10499017
OpenAlexW4385577005

What Socratic holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.