Evidence map›Paper›PMID 37548614›Full record

ArticleAdvanced science (Weinheim, Baden-Wurttemberg, Germany)2023

The Histone Chaperones SET/TAF-1β and NPM1 Exhibit Conserved Functionality in Nucleosome Remodeling and Histone Eviction in a Cytochrome c-Dependent Manner.

Pedro Buzón, Alejandro Velázquez-Cruz, Laura Corrales-Guerrero, Antonio Díaz-Quintana, Irene Díaz-Moreno, Wouter H Roos

Open access · goldAbstract read
In one paragraph

Article in Advanced science (Weinheim, Baden-Wurttemberg, Germany), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.2field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. CytochromeiScience · 2024
    Article
  7. Review
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Pedro BuzónMoleculaire Biofysica, Zernike Instituut, Rijksuniversiteit Groningen, Nijenborgh 4, Groningen, 9747 AG, The Netherlands.ORCID 0000-0002-1282-9006
Alejandro Velázquez-CruzInstituto de Investigaciones Químicas (IIQ), Centro de Investigaciones Científicas Isla de la Cartuja (cicCartuja), Universidad de Sevilla - Consejo Superior de Investigaciones Científicas (CSIC), Avda. Américo Vespucio 49, Sevilla, 41092, Spain.
Laura Corrales-GuerreroInstituto de Investigaciones Químicas (IIQ), Centro de Investigaciones Científicas Isla de la Cartuja (cicCartuja), Universidad de Sevilla - Consejo Superior de Investigaciones Científicas (CSIC), Avda. Américo Vespucio 49, Sevilla, 41092, Spain.
Antonio Díaz-QuintanaInstituto de Investigaciones Químicas (IIQ), Centro de Investigaciones Científicas Isla de la Cartuja (cicCartuja), Universidad de Sevilla - Consejo Superior de Investigaciones Científicas (CSIC), Avda. Américo Vespucio 49, Sevilla, 41092, Spain.
Irene Díaz-MorenoInstituto de Investigaciones Químicas (IIQ), Centro de Investigaciones Científicas Isla de la Cartuja (cicCartuja), Universidad de Sevilla - Consejo Superior de Investigaciones Científicas (CSIC), Avda. Américo Vespucio 49, Sevilla, 41092, Spain.
Wouter H RoosMoleculaire Biofysica, Zernike Instituut, Rijksuniversiteit Groningen, Nijenborgh 4, Groningen, 9747 AG, The Netherlands.ORCID 0000-0002-5104-0139
Consejo Superior de Investigaciones Científicas · ESUniversity of Groningen · NL

Funding

EMBO 8541European ARBRE-Mobieu consortium Action CA15126European Social Fund PAIDI-DOCTOR 2020 DOC_00796Nederlandse Organisatie voor Wetenschappelijk Onderzoek VidiRamón Areces Foundation 2021-2024Regional Government of Andalusia BIO198Regional Government of Andalusia P18-FR-3487Regional Government of Andalusia P18-HO-4091Regional Government of Andalusia UERegional Government of Andalusia US-1254317 US/JUNTA/FEDERSpanish Ministry of Education, Culture and Sports FPU016/01513Spanish Ministry of Science and Innovation PGC 2018-096049- BI00Spanish Ministry of Science and Innovation PID2021-126663NB-100
6 · The paper itself

Abstract

Chromatin homeostasis mediates essential processes in eukaryotes, where histone chaperones have emerged as major regulatory factors during DNA replication, repair, and transcription. The dynamic nature of these processes, however, has severely impeded their characterization at the molecular level. Here, fluorescence optical tweezers are applied to follow histone chaperone dynamics in real time. The molecular action of SET/template-activating factor-Iβ and nucleophosmin 1-representing the two most common histone chaperone folds-are examined using both nucleosomes and isolated histones. It is shown that these chaperones present binding specificity for fully dismantled nucleosomes and are able to recognize and disrupt non-native histone-DNA interactions. Furthermore, the histone eviction process and its modulation by cytochrome c are scrutinized. This approach shows that despite the different structures of these chaperones, they present conserved modes of action mediating nucleosome remodeling.

Indexed as

HistonesNucleosomesCarrier ProteinsChromatinCytochromes cHistone ChaperonesMolecular ChaperonesCarrier ProteinsChromatinCytochromes cHistone ChaperonesHistonesMolecular ChaperonesNucleosomesfluorescence microscopynucleophosmin 1optical tweezersSET/template-activating factor-Iβsingle-molecule methods

Identifiers

PMID37548614
PMCPMC10582448
OpenAlexW4385619828

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.