Evidence map›Paper›PMID 37556551›Full record

ArticleScience advances2023

The minimal intrinsic stochasticity of constitutively expressed eukaryotic genes is sub-Poissonian.

Douglas E Weidemann, James Holehouse, Abhyudai Singh, Ramon Grima, Silke Hauf

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
6.6field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
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  3. Establishing MS2-MCP-based single-molecule RNA visualization inbioRxiv : the preprint server for biology · 2026
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  11. Deterministic patterns in single-cell transcriptomic data.NPJ systems biology and applications · 2025
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Douglas E WeidemannDepartment of Biological Sciences, Virginia Tech, Blacksburg, VA 24061, USA.ORCID 0000-0002-6751-4327
James HolehouseThe Santa Fe Institute, 1399 Hyde Park Road, Santa Fe, NM 87510, USA.
Abhyudai SinghDepartment of Electrical and Computer Engineering, University of Delaware, Newark, DE 19716, USA.ORCID 0000-0002-1451-2838
Ramon GrimaSchool of Biological Sciences, University of Edinburgh, Edinburgh EH9 3JR, UK.ORCID 0000-0002-1266-8169
Silke HaufDepartment of Biological Sciences, Virginia Tech, Blacksburg, VA 24061, USA.ORCID 0000-0001-5938-721X
Virginia Tech · USSanta Fe Institute · USUniversity of Delaware · USUniversity of Edinburgh · GB

Funding

The role of the cyclin B 5'UTR in cyclin translation and functionR35GM119723 · NIGMS · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI HAUF, SILKE · 2016 to 2020
$1.8M
Generalized fluctuation test for deciphering phenotypic switching within cell populationsR35GM148351 · NIGMS · UNIVERSITY OF DELAWARE · PI Abhyudai Singh · 2023 to 2026
$1.6M
How mRNA features of cell cycle genes support proper cell divisionR35GM149565 · NIGMS · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI Silke Hauf · 2023 to 2026
$1.5M
NIGMS NIH HHS R35 GM119723NIGMS NIH HHS R35 GM148351NIGMS NIH HHS R35 GM149565
6 · The paper itself

Abstract

Gene expression inherently gives rise to stochastic variation ("noise") in the production of gene products. Minimizing noise is crucial for ensuring reliable cellular functions. However, noise cannot be suppressed below a certain intrinsic limit. For constitutively expressed genes, this limit is typically assumed to be Poissonian noise, wherein the variance in mRNA numbers is equal to their mean. Here, we demonstrate that several cell division genes in fission yeast exhibit mRNA variances significantly below this limit. The reduced variance can be explained by a gene expression model incorporating multiple transcription and mRNA degradation steps. Notably, in this sub-Poissonian regime, distinct from Poissonian or super-Poissonian regimes, cytoplasmic noise is effectively suppressed through a higher mRNA export rate. Our findings redefine the lower limit of eukaryotic gene expression noise and uncover molecular requirements for achieving ultralow noise, which is expected to be important for vital cellular functions.

Indexed as

EukaryotaEukaryotic CellsCell DivisionCytoplasmRNA, MessengerRNA, Messenger

Identifiers

PMID37556551
PMCPMC10411910
OpenAlexW4385690752

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.