Evidence map›Paper›PMID 37565748›Full record

ArticleJournal of virology2023

Human cytomegalovirus mediates APOBEC3B relocalization early during infection through a ribonucleotide reductase-independent mechanism.

Elisa Fanunza, Adam Z Cheng, Ashley A Auerbach, Bojana Stefanovska, Sofia N Moraes, James R Lokensgard, Matteo Biolatti, Valentina Dell'Oste, Craig J Bierle, Wade A Bresnahan and 1 more

Open access · hybridAbstract read
In one paragraph

Article in Journal of virology, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.0field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Journal of virology · 2026
    Article
  3. Article
  4. Article
  5. Regulatory Interactions between APOBEC3B N- and C-Terminal Domains.Journal of chemical information and modeling · 2025
    Article
  6. Review
  7. Article
  8. Regulatory interactions between APOBEC3B N- and C-terminal domains.bioRxiv : the preprint server for biology · 2024
    Article
  9. Review
  10. Article
  11. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Elisa FanunzaDepartment of Biochemistry and Structural Biology, University of Texas Health San Antonio , San Antonio, Texas, USA.ORCID 0000-0002-2044-8473
Adam Z ChengDepartment of Biochemistry, Molecular Biology and Biophysics, University of Minnesota , Minneapolis, Minnesota, USA.
Ashley A AuerbachDepartment of Biochemistry and Structural Biology, University of Texas Health San Antonio , San Antonio, Texas, USA.
Bojana StefanovskaDepartment of Biochemistry and Structural Biology, University of Texas Health San Antonio , San Antonio, Texas, USA.
Sofia N MoraesDepartment of Biochemistry, Molecular Biology and Biophysics, University of Minnesota , Minneapolis, Minnesota, USA.
James R LokensgardDepartment of Medicine, University of Minnesota , Minneapolis, Minnesota, USA.
Matteo BiolattiDepartment of Public Health and Pediatric Sciences, University of Turin , Turin, Italy.
Valentina Dell'OsteDepartment of Public Health and Pediatric Sciences, University of Turin , Turin, Italy.
Craig J BierleDepartment of Pediatrics, Division of Pediatric Infectious Diseases and Immunology, University of Minnesota , Minneapolis, Minnesota, USA.
Wade A BresnahanDepartment of Microbiology and Immunology, University of Minnesota , Minneapolis, Minnesota, USA.
Reuben S HarrisDepartment of Biochemistry and Structural Biology, University of Texas Health San Antonio , San Antonio, Texas, USA.ORCID 0000-0002-9034-9112
University of Minnesota · USHoward Hughes Medical Institute · USThe University of Texas Health Science Center at San Antonio · USUniversity of Turin · IT

Funding

PROJECT 3 – BIOLOGY OF DNA DEAMINASES IN CANCERP01CA234228 · NCI · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI Reuben S Harris · 2019 to 2026
$14.5M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM008244 · NIGMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI SHIMIZU, YOJI · 1988 to 2024
$13.6M
APOBEC3 Proteins in HIV RestrictionR37AI064046 · NIAID · UNIVERSITY OF TEXAS HLTH SCIENCE CENTER · PI HARRIS, REUBEN S · 2015 to 2024
$4.2M
Minnesota Training Program in VirologyT32AI083196 · NIAID · UNIVERSITY OF MINNESOTA · PI Louis M Mansky · 2010 to 2026
$3.2M
Molecular Mechanisms of APOBEC-Induced Mutagenesis in CancerR37CA252081 · NCI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Remi Buisson · 2021 to 2026
$2.5M
HIV-1 Vif in AIDS-Related MalignanciesF30CA200432 · NCI · UNIVERSITY OF MINNESOTA · PI CHENG, ADAM Z · 2015 to 2019
$213k
A dual role for APOBEC counteraction in EBV infectionF31AI161910 · NIAID · UNIVERSITY OF MINNESOTA · PI MORAES, SOFIA · 2021 to 2021
$8k
Howard Hughes Medical InstituteNCI NIH HHS F30 CA200432NCI NIH HHS P01 CA234228NIAID NIH HHS F31 AI161910NIAID NIH HHS R37 AI064046NIAID NIH HHS T32 AI083196NIGMS NIH HHS T32 GM008244
6 · The paper itself

Abstract

The APOBEC3 family of DNA cytosine deaminases comprises an important arm of the innate antiviral defense system. The gamma-herpesviruses Epstein-Barr virus and Kaposi's sarcoma-associated herpesvirus and the alpha-herpesviruses herpes simplex virus (HSV)-1 and HSV-2 have evolved an efficient mechanism to avoid APOBEC3 restriction by directly binding to APOBEC3B and facilitating its exclusion from the nuclear compartment. The only viral protein required for APOBEC3B relocalization is the large subunit of the ribonucleotide reductase (RNR). Here, we ask whether this APOBEC3B relocalization mechanism is conserved with the beta-herpesvirus human cytomegalovirus (HCMV). Although HCMV infection causes APOBEC3B relocalization from the nucleus to the cytoplasm in multiple cell types, the viral RNR (UL45) is not required. APOBEC3B relocalization occurs rapidly following infection suggesting the involvement of an immediate early or early (IE/E) viral protein. In support of this possibility, genetic (IE1 mutant) and pharmacologic (cycloheximide) strategies that prevent the expression of IE/E viral proteins also block APOBEC3B relocalization. In comparison, the treatment of infected cells with phosphonoacetic acid, which interferes with viral late protein expression, still permits A3B relocalization. These results combine to indicate that the beta-herpesvirus HCMV uses an RNR-independent, yet phenotypically similar, molecular mechanism to antagonize APOBEC3B. IMPORTANCE Human cytomegalovirus (HCMV) infections can range from asymptomatic to severe, particularly in neonates and immunocompromised patients. HCMV has evolved strategies to overcome host-encoded antiviral defenses to achieve lytic viral DNA replication and dissemination and, under some conditions, latency and long-term persistence. Here, we show that HCMV infection causes the antiviral factor, APOBEC3B, to relocalize from the nuclear compartment to the cytoplasm. This overall strategy resembles that used by related herpesviruses. However, the HCMV relocalization mechanism utilizes a different viral factor(s) and available evidence suggests the involvement of at least one protein expressed at the early stages of infection. This knowledge is important because a greater understanding of this mechanism could lead to novel antiviral strategies that enable APOBEC3B to naturally restrict HCMV infection.

Indexed as

Epstein-Barr Virus InfectionsHerpesviridae InfectionsHerpesvirus 1, HumanRibonucleotide ReductasesCytidine DeaminaseCytomegalovirusDNA ReplicationDNA, ViralHerpesvirus 4, HumanHumansImmediate-Early ProteinsInfant, NewbornMinor Histocompatibility AntigensViral ProteinsVirus ReplicationAPOBEC3B protein, humanCytidine DeaminaseDNA, ViralImmediate-Early ProteinsMinor Histocompatibility AntigensRibonucleotide ReductasesViral ProteinsAPOBEC3B (A3B)herpesviruseshuman cytomegalovirusimmediate-early genesinnate immunityribonucleotide reductase

Identifiers

PMID37565748
PMCPMC10506462
OpenAlexW4385751161

What Socratic holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.