Evidence map›Paper›PMID 37569563›Full record

ArticleInternational journal of molecular sciences2023

Surveillance of Human Rotaviruses in Wuhan, China (2019-2022): Whole-Genome Analysis of Emerging DS-1-like G8P[8] Rotavirus.

Xuan Zhou, Yuanhong Wang, Nan Chen, Beibei Pang, Manqing Liu, Kun Cai, Nobumichi Kobayashi

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 2 pooled it
4.1field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 2 syntheses or guidelines pooled it, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 2 countries.

Xuan ZhouDivision of Microbiology, Wuhan Center for Disease Control and Prevention, Wuhan 430024, China.ORCID 0000-0002-7884-9018
Yuanhong WangDivision of Microbiology, Wuhan Center for Disease Control and Prevention, Wuhan 430024, China.
Nan ChenDepartment of Aquatic Animal Medicine, College of Fisheries, Huazhong Agricultural University, Wuhan 430070, China.
Beibei PangDivision of Microbiology, Wuhan Center for Disease Control and Prevention, Wuhan 430024, China.
Manqing LiuDivision of Microbiology, Wuhan Center for Disease Control and Prevention, Wuhan 430024, China.ORCID 0000-0002-9754-3102
Kun CaiInstitute of Health Inspection and Testing, Hubei Provincial Center for Disease Control and Prevention, Wuhan 430079, China.ORCID 0000-0002-4321-133X
Nobumichi KobayashiDepartment of Hygiene, Sapporo Medical University School of Medicine, Sapporo 060-8556, Japan.ORCID 0000-0002-0146-6211
Wuhan Center for Disease Control and Prevention · CNHuazhong Agricultural University · CNHubei Provincial Center for Disease Control and Prevention · CNSapporo Medical University · JP

Funding

the Fundamental Research Funds for the Central Universities 2662018JC023the Hubei Provincial Nature Science Foundation 2020CFB516the Joint Foundation Project of Hubei Health Commission WJ2019H310the Preventive Medicine and Science Research Foundation of Wuhan WY19A06
6 · The paper itself

Abstract

Group A rotaviruses (RVAs) are major etiologic agents of gastroenteritis in infants and young children worldwide. To study the prevalence and genetic characteristics of RVAs, a hospital-based surveillance study was conducted in Wuhan, China from June 2019 through May 2022. The detection rates of RVAs were 19.40% (142/732) and 3.51% (8/228) in children and adults, respectively. G9P[8] was the predominant genotype, followed by G8P[8] and G3P[8]. G8P[8] emerged and was dominant in the 2021-2022 epidemic season. The genome constellation of six G8P[8] strains was assigned to G8-P[8]-I2-R2-C2-M2-A2-N2-T2-E2-H2. Phylogenetic analysis revealed that the VP7, VP4, VP2, VP3, NSP1, NSP2, NSP3, and NSP5 genes of these G8P[8] strains clustered closely with those of the G8P[8] strains in Asia and were distant from those of the P[8] and G2P[4] strains simultaneously detected in Wuhan. In contrast, the VP1, VP6, and NSP4 genes were closely related to the typical G2P[4] rotavirus, including those of G2P[4] strains simultaneously detected in Wuhan. The detection rate of RVAs decreased in the COVID-19 pandemic era. It was deduced that the G8P[8] rotaviruses that emerged in China may be reassortants, carrying the VP6, VP1, and NSP4 genes derived from the G2P[4] rotavirus in the backbone of the neighboring DS-1-like G8P[8] strains represented by CAU17L-103.

Indexed as

COVID-19RotavirusRotavirus InfectionsChildChild, PreschoolChinaGenome, ViralGenotypeHumansInfantPandemicsPhylogenyCOVID-19 eraG2P[4]G8genomereassortmentrotavirus

Identifiers

PMID37569563
PMCPMC10419309
OpenAlexW4385422205

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.