Evidence map›Paper›PMID 37574498›Full record

ArticleJournal of assisted reproduction and genetics2023

A novel splicing mutation in helicase for meiosis 1 leads to non-obstructive azoospermia.

Liangyu Yao, Yifeng Ge, Tian Du, Tong Chen, Jinzhao Ma, Ninghong Song

Abstract read
In one paragraph

Article in Journal of assisted reproduction and genetics, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Liangyu Yao *Department of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, 210029, China.
Yifeng Ge *Department of Reproductive Medical Center, Jinling Hospital, Affiliated Hospital of Medical School, Nanjing University, Nanjing, 210002, China.
Tian Du *Department of Reproductive Medical Center, Jinling Hospital, Affiliated Hospital of Medical School, Southeast University, Nanjing, 210002, China.
Tong ChenDepartment of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, 210029, China.
Jinzhao MaDepartment of Reproductive Medical Center, Jinling Hospital, Affiliated Hospital of Medical School, Nanjing University, Nanjing, 210002, China. majinzhao07@163.com.
Ninghong SongDepartment of Urology, The First Affiliated Hospital of Nanjing Medical University, Nanjing, 210029, China. songninghong_urol@163.com.ORCID http://orcid.org/0000-0001-5305-1264

Funding

National Natural Science Foundation of China 82001618National Natural Science Foundation of China 82071638
6 · The paper itself

Abstract

purposeNon-obstructive azoospermia (NOA) is an essential cause of male infertility for which treatment options are limited. The pathogenic mechanism of NOA, especially idiopathic NOA, remains unclear. Gene variations are associated with the occurrence of NOA. Our study was performed to investigate the genetic causes of NOA.

methodsWhole exome sequencing (WES) was performed in two probands diagnosed with NOA from a Chinese family. Sanger sequencing was applied to verify the pathogenic variants. A minigene assay was carried out to identify the effect of the splicing variants.

resultsWe detected a novel homozygous variant (c.2681-3 T > A) in the HFM1 gene in the two siblings diagnosed with NOA, and their parents carried heterozygous mutations in the same gene. The results of the minigene assay revealed this splicing variant results in exon25 of HFM1 being skipped, leading to a protein truncation (p.Trp894Cysfs*44).

conclusionOur results showed that a deleterious splicing variant in HFM1 was related to NOA in these two patients. This novel variant of HFM1 may serve as a potential genetic biomarker for NOA patients.

Indexed as

AzoospermiaInfertility, MaleHumansMaleMeiosisMutationHFM1Non-obstructive azoospermiaSplicing variantWhole exome sequencing

Identifiers

PMID37574498
PMCPMC10504198

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.