Evidence map›Paper›PMID 37578596›Full record

ArticleCellular and molecular life sciences : CMLS2023

Characterization of K562 cells: uncovering novel chromosomes, assessing transferrin receptor expression, and probing pharmacological therapies.

Tom C Karagiannis, Meaghan Wall, Katherine Ververis, Eleni Pitsillou, Stephanie M Tortorella, Peter A Wood, Haloom Rafehi, Ishant Khurana, Scott S Maxwell, Andrew Hung and 2 more

Open access · greenAbstract read
In one paragraph

Article in Cellular and molecular life sciences : CMLS, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 15 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 5 countries.

Tom C KaragiannisEpigenetics in Human Health and Disease Program, Baker Heart and Diabetes Institute, 75 Commercial Road, Prahran, VIC, 3004, Australia. karat@unimelb.edu.au.ORCID http://orcid.org/0000-0002-9967-1546
Meaghan WallVictorian Cancer Cytogenetics Service, St Vincent's Hospital, Fitzroy, VIC, 3065, Australia.
Katherine VerverisEpigenomic Medicine Laboratory at prospED Training, Carlton, VIC, 3053, Australia.
Eleni PitsillouEpigenomic Medicine Laboratory at prospED Training, Carlton, VIC, 3053, Australia.
Stephanie M TortorellaEpigenomic Medicine Laboratory at prospED Training, Carlton, VIC, 3053, Australia.
Peter A WoodEpigenomic Medicine Laboratory at prospED Training, Carlton, VIC, 3053, Australia.
Haloom RafehiPopulation Health and Immunity, Walter and Eliza Hall Institute of Medical Research, Parkville, VIC, 3052, Australia.
Ishant KhuranaEpigenetics in Human Health and Disease Program, Baker Heart and Diabetes Institute, 75 Commercial Road, Prahran, VIC, 3004, Australia.
Scott S MaxwellEpigenetics in Human Health and Disease Program, Baker Heart and Diabetes Institute, 75 Commercial Road, Prahran, VIC, 3004, Australia.
Andrew HungSchool of Science, STEM College, RMIT University, VIC, 3001, Australia.
Jitraporn VongsvivutANSTO-Australian Synchrotron, Clayton, VIC, 3168, Australia.
Assam El-OstaEpigenetics in Human Health and Disease Program, Baker Heart and Diabetes Institute, 75 Commercial Road, Prahran, VIC, 3004, Australia.
Baker Heart and Diabetes Institute · AUThe University of Melbourne · AURMIT University · AUAustralian Nuclear Science and Technology Organisation · AUWalter and Eliza Hall Institute of Medical Research · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Human erythroleukemic K562 cells represent the prototypical cell culture model of chronic myeloid leukemia (CML). The cells are pseudo-triploid and positive for the Philadelphia chromosome. Therefore, K562 cells have been widely used for investigating the BCR/ABL1 oncogene and the tyrosine kinase inhibitor, imatinib-mesylate. Further, K562 cells overexpress transferrin receptors (TfR) and have been used as a model for targeting cytotoxic therapies, via receptor-mediated endocytosis. Here, we have characterized K562 cells focusing on the karyotype of cells in prolonged culture, regulation of expression of TfR in wildtype (WT) and doxorubicin-resistant cells, and responses to histone deacetylase inhibition (HDACi). Karyotype analysis indicates novel chromosomes and gene expression analysis suggests a shift of cultured K562 cells away from patient-derived leukemic cells. We confirm the high expression of TfR on K562 cells using immunofluorescence and cell-surface receptor binding radioassays. Importantly, high TfR expression is observed in patient-derived cells, and we highlight the persistent expression of TfR following doxorubicin acquired resistance. Epigenetic analysis indicates that permissive histone acetylation and methylation at the promoter region regulates the transcription of TfR in K562 cells. Finally, we show relatively high expression of HDAC enzymes in K562 cells and demonstrate the chemotoxic effects of HDACi, using the FDA-approved hydroxamic acid, vorinostat. Together with a description of morphology, infrared spectral analysis, and examination of metabolic properties, we provide a comprehensive characterization of K562 cells. Overall, K562 cell culture systems remain widely used for the investigation of novel therapeutics for CML, which is particularly important in cases of imatinib-mesylate resistance.

Indexed as

Fusion Proteins, bcr-ablLeukemia, Myelogenous, Chronic, BCR-ABL PositiveApoptosisChromosomesDoxorubicinDrug Resistance, NeoplasmHistone DeacetylasesHumansImatinib MesylateK562 CellsMesylatesPyrimidinesReceptors, TransferrinTransferrinDoxorubicinFusion Proteins, bcr-ablHistone DeacetylasesImatinib MesylateMesylatesPyrimidinesReceptors, TransferrinTransferrinBCR-ABLChronic myeloid leukemiaDoxorubicinHistone deacetylase inhibitorsK562 cellsPhiladelphia chromosomeTransferrin receptors

Identifiers

PMID37578596
PMCPMC11072675
OpenAlexW4385798965

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.