Evidence map›Paper›PMID 37587020›Full record

ArticleAdvanced science (Weinheim, Baden-Wurttemberg, Germany)2023

Accurate Prediction of Antimicrobial Susceptibility for Point-of-Care Testing of Urine in Less than 90 Minutes via iPRISM Cassettes.

Xin Jiang, Talya Borkum, Sagi Shprits, Joseph Boen, Sofia Arshavsky-Graham, Baruch Rofman, Merav Strauss, Raul Colodner, Jeremias Sulam, Sarel Halachmi and 2 more

Open access · goldAbstract read
In one paragraph

Article in Advanced science (Weinheim, Baden-Wurttemberg, Germany), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 4 institutions in 2 countries.

Xin JiangDepartment of Biotechnology and Food Engineering, Technion - Israel Institute of Technology, Haifa, 3200003, Israel.ORCID 0000-0001-7693-1619
Talya BorkumDepartment of Biotechnology and Food Engineering, Technion - Israel Institute of Technology, Haifa, 3200003, Israel.
Sagi ShpritsDepartment of Urology, Bnai Zion Medical Center, Haifa, 3104800, Israel.
Joseph BoenDepartment of Biomedical Engineering, Johns Hopkins University, Clark 320B, 3400 N Charles St, Baltimore, MD, 21218, USA.
Sofia Arshavsky-GrahamDepartment of Biotechnology and Food Engineering, Technion - Israel Institute of Technology, Haifa, 3200003, Israel.
Baruch RofmanDepartment of Mechanical Engineering, Technion - Israel Institute of Technology, Haifa, 3200003, Israel.
Merav StraussLaboratory of Clinical Microbiology, Emek Medical Center, Afula, 1834111, Israel.
Raul ColodnerLaboratory of Clinical Microbiology, Emek Medical Center, Afula, 1834111, Israel.
Jeremias SulamDepartment of Biomedical Engineering, Johns Hopkins University, Clark 320B, 3400 N Charles St, Baltimore, MD, 21218, USA.ORCID 0000-0003-0946-1957
Sarel HalachmiDepartment of Urology, Bnai Zion Medical Center, Haifa, 3104800, Israel.ORCID 0000-0002-8180-8030
Heidi LeonardDepartment of Biotechnology and Food Engineering, Technion - Israel Institute of Technology, Haifa, 3200003, Israel.ORCID 0000-0003-2461-6822
Ester SegalDepartment of Biotechnology and Food Engineering, Technion - Israel Institute of Technology, Haifa, 3200003, Israel.ORCID 0000-0001-9472-754X
Technion – Israel Institute of Technology · ILEmek Medical Center · ILJohns Hopkins University · USBnai Zion Medical Center · IL

Funding

Israel Innovation AuthorityIsrael Science Foundation 2458/21
6 · The paper itself

Abstract

The extensive and improper use of antibiotics has led to a dramatic increase in the frequency of antibiotic resistance among human pathogens, complicating infectious disease treatments. In this work, a method for rapid antimicrobial susceptibility testing (AST) is presented using microstructured silicon diffraction gratings integrated into prototype devices, which enhance bacteria-surface interactions and promote bacterial colonization. The silicon microstructures act also as optical sensors for monitoring bacterial growth upon exposure to antibiotics in a real-time and label-free manner via intensity-based phase-shift reflectometric interference spectroscopic measurements (iPRISM). Rapid AST using clinical isolates of Escherichia coli (E. coli) from urine is established and the assay is applied directly on unprocessed urine samples from urinary tract infection patients. When coupled with a machine learning algorithm trained on clinical samples, the iPRISM AST is able to predict the resistance or susceptibility of a new clinical sample with an Area Under the Receiver Operating Characteristic curve (AUC) of ∼ 0.85 in 1 h, and AUC > 0.9 in 90 min, when compared to state-of-the-art automated AST methods used in the clinic while being an order of magnitude faster.

Indexed as

Escherichia coliSiliconAnti-Bacterial AgentsHumansMicrobial Sensitivity TestsPoint-of-Care TestingAnti-Bacterial AgentsSiliconantibiotic resistanceantimicrobial susceptibility testingbacteriadiffraction gratingsmachine learningoptical sensorsurinary tract infecion

Identifiers

PMID37587020
PMCPMC10625094
OpenAlexW4385898010

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.