Evidence map›Paper›PMID 37587872›Full record

ArticleEMBO molecular medicine2023

Discovery of oncogenic ROS1 missense mutations with sensitivity to tyrosine kinase inhibitors.

Sudarshan R Iyer, Kevin Nusser, Kristen Jones, Pushkar Shinde, Clare Keddy, Catherine Z Beach, Erin Aguero, Jeremy Force, Ujwal Shinde, Monika A Davare

Open access · goldAbstract read
In one paragraph

Article in EMBO molecular medicine, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
3.1field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Sudarshan R Iyer *Division of Pediatric Hematology/Oncology, Department of Pediatrics, Papé Family Pediatric Research Institute, Oregon Health and Sciences University, OR, Portland, USA.ORCID 0000-0001-7837-1854
Kevin Nusser *Division of Pediatric Hematology/Oncology, Department of Pediatrics, Papé Family Pediatric Research Institute, Oregon Health and Sciences University, OR, Portland, USA.
Kristen Jones *Division of Pediatric Hematology/Oncology, Department of Pediatrics, Papé Family Pediatric Research Institute, Oregon Health and Sciences University, OR, Portland, USA.
Pushkar ShindeDepartment of Chemical Physiology, Oregon Health and Sciences University, OR, Portland, USA.
Clare KeddyDivision of Pediatric Hematology/Oncology, Department of Pediatrics, Papé Family Pediatric Research Institute, Oregon Health and Sciences University, OR, Portland, USA.ORCID 0000-0001-5083-7296
Catherine Z BeachDivision of Pediatric Hematology/Oncology, Department of Pediatrics, Papé Family Pediatric Research Institute, Oregon Health and Sciences University, OR, Portland, USA.ORCID 0000-0003-0750-3658
Erin AgueroDivision of Pediatric Hematology/Oncology, Department of Pediatrics, Papé Family Pediatric Research Institute, Oregon Health and Sciences University, OR, Portland, USA.
Jeremy ForceDepartment of Medicine, Division of Medical Oncology, Duke Cancer Institute, Duke University, NC, Durham, USA.
Ujwal ShindeDepartment of Chemical Physiology, Oregon Health and Sciences University, OR, Portland, USA.
Monika A DavareDivision of Pediatric Hematology/Oncology, Department of Pediatrics, Papé Family Pediatric Research Institute, Oregon Health and Sciences University, OR, Portland, USA.ORCID 0000-0003-1802-7597
Oregon Health & Science University · USDuke Medical Center · US

Funding

Functional impact, mechanistic role, and targetability of ROS1 aberrations in cancerR01CA233495 · NCI · OREGON HEALTH & SCIENCE UNIVERSITY · PI Monika A Davare · 2020 to 2026
$1.8M
Resistance Mechanisms in ROS1-Fusion-Driven MalignanciesF30CA247253 · NCI · OREGON HEALTH & SCIENCE UNIVERSITY · PI IYER, SUDARSHAN RAJAN · 2020 to 2024
$242k
NCI NIH HHS F30 CA247253NCI NIH HHS R01 CA233495
6 · The paper itself

Abstract

ROS1 is the largest receptor tyrosine kinase in the human genome. Rearrangements of the ROS1 gene result in oncogenic ROS1 kinase fusion proteins that are currently the only validated biomarkers for targeted therapy with ROS1 TKIs in patients. While numerous somatic missense mutations in ROS1 exist in the cancer genome, their impact on catalytic activity and pathogenic potential is unknown. We interrogated the AACR Genie database and identified 34 missense mutations in the ROS1 tyrosine kinase domain for further analysis. Our experiments revealed that these mutations have varying effects on ROS1 kinase function, ranging from complete loss to significantly increased catalytic activity. Notably, Asn and Gly substitutions at Asp2113 in the ROS1 kinase domain were found to be TKI-sensitive oncogenic variants in cell-based model systems. In vivo experiments showed that ROS1 D2113N induced tumor formation that was sensitive to crizotinib and lorlatinib, FDA-approved ROS1-TKIs. Collectively, these findings highlight the tumorigenic potential of specific point mutations within the ROS1 kinase domain and their potential as therapeutic targets with FDA-approved ROS1-TKIs.

Indexed as

Carcinoma, Non-Small-Cell LungLung NeoplasmsTyrosine Kinase InhibitorsHumansMutation, MissenseProtein Kinase InhibitorsProtein-Tyrosine KinasesProto-Oncogene ProteinsProtein Kinase InhibitorsProtein-Tyrosine KinasesProto-Oncogene ProteinsROS1 protein, humanTyrosine Kinase Inhibitorscancer mutationsROS1TKI

Identifiers

PMID37587872
PMCPMC10565643
OpenAlexW4385897947

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.