Evidence map›Paper›PMID 37626264›Full record

ArticleBritish journal of cancer2023

PROTAC-mediated CDK degradation differentially impacts cancer cell cycles due to heterogeneity in kinase dependencies.

Vishnu Kumarasamy, Zhe Gao, Bosheng Zhao, Baishan Jiang, Seth M Rubin, Kevin Burgess, Agnieszka K Witkiewicz, Erik S Knudsen

Open access · greenAbstract read
In one paragraph

Article in British journal of cancer, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 15 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Review
  5. Review
  6. Review
  7. Review
  8. Article
  9. Review
  10. Review
  11. PROTACs in Ovarian Cancer: Current Advancements and Future Perspectives.International journal of molecular sciences · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Vishnu KumarasamyDepartment of Molecular and Cellular Biology, Roswell Park Cancer Institute, Buffalo, NY, USA.
Zhe GaoDepartment of Chemistry, Texas A&M University, Box 30012, College Station, TX, USA.
Bosheng ZhaoDepartment of Chemistry, Texas A&M University, Box 30012, College Station, TX, USA.
Baishan JiangDepartment of Radiation and Medical Oncology, Medical Research Institute, Frontier Science Center of Immunology and Metabolism, Zhongnan Hospital of Wuhan University, Wuhan University, Wuhan, China.ORCID 0000-0001-6796-9500
Seth M RubinDepartment of Chemistry and Biochemistry, University of California, Santa Cruz, CA, USA.
Kevin BurgessDepartment of Chemistry, Texas A&M University, Box 30012, College Station, TX, USA.
Agnieszka K WitkiewiczDepartment of Molecular and Cellular Biology, Roswell Park Cancer Institute, Buffalo, NY, USA.
Erik S KnudsenDepartment of Molecular and Cellular Biology, Roswell Park Cancer Institute, Buffalo, NY, USA. Erik.Knudsen@roswellpark.org.ORCID 0000-0002-5130-5969
Roswell Park Comprehensive Cancer Center · USTexas A&M University · USUniversity of California, Santa Cruz · USWuhan University · CN

Funding

RB tumor suppressor as a therapeutic target in ER-positive breast cancerR01CA247362 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI KNUDSEN, ERIK, WITKIEWICZ, AGNIESZKA · 2020 to 2024
$3.1M
Molecular Mechanisms of Cell Cycle Dependent Gene ExpressionR35GM145255 · NIGMS · UNIVERSITY OF CALIFORNIA SANTA CRUZ · PI Seth Michael Rubin · 2022 to 2026
$3.0M
Delineating the dystopian nature of the cell cycle in cancerR01CA267647 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI Erik Knudsen, Agnieszka Witkiewicz · 2022 to 2026
$2.7M
NCI NIH HHS R01 CA247362NCI NIH HHS R01 CA267647NIGMS NIH HHS R35 GM145255
6 · The paper itself

Abstract

backgroundCyclin-dependent kinase 4 and 6 (CDK4/6) inhibition yields differential cellular responses in multiple tumor models due to redundancy in cell cycle. We investigate whether the differential requirements of CDKs in multiple cell lines function as determinant of response to pharmacological agents that target these kinases.

methodsWe utilized proteolysis-targeted chimeras (PROTACs) that are conjugated with palbociclib (Palbo-PROTAC) to degrade both CDK4 and CDK6. FN-POM was synthesized by chemically conjugating pomalidomide moiety with a multi-kinase inhibitor, FN-1501. Patient derived PDAC organoids and PDX model were utilized to investigate the effect of FN-POM in combination with palbociclib.

resultsPalbo-PROTAC mediates differential impact on cell cycle in different tumor models, indicating that the dependencies to CDK4 and 6 kinases are heterogenous. Cyclin E overexpression uncouples cell cycle from CDK4/6 and drives resistance to palbo-PROTAC. Elevated expression of P16INK4A antagonizes PROTAC-mediated degradation of CDK4 and 6. FN-POM degrades cyclin E and CDK2 and inhibits cell cycle progression in P16INK4A-high tumor models. Combination of palbociclib and FN-POM cooperatively inhibit tumor cell proliferation via RB activation.

conclusionResistance to CDK4/6 inhibition could be overcome by pharmacologically limiting Cyclin E/CDK2 complex and proves to be a potential therapeutic approach.

Indexed as

Cell CycleCyclin-Dependent Kinase 4Cyclin-Dependent Kinase 6PiperazinesProtein Kinase InhibitorsProteolysisPyridinesAnimalsCell Line, TumorCell ProliferationHumansMiceThalidomideXenograft Model Antitumor AssaysCDK4 protein, humanCDK6 protein, humanCyclin-Dependent Kinase 4Cyclin-Dependent Kinase 6palbociclibPiperazinesProtein Kinase InhibitorsPyridinesThalidomide

Identifiers

PMID37626264
PMCPMC10575895
OpenAlexW4386156792

What Socratic holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.