Evidence map›Paper›PMID 37629534›Full record

ArticleLife (Basel, Switzerland)2023

Narrowing the Relationship between Human CCR5 Gene Polymorphisms and Chagas Disease: Systematic Review and Meta-Analysis.

Jean Moisés Ferreira, Barbara Rayssa Correia Dos Santos, Edilson Leite de Moura, Ana Caroline Melo Dos Santos, Jean Carlos Vencioneck Dutra, Elaine Virgínia Martins de Sousa Figueiredo, José Luiz de Lima Filho

Abstract read
In one paragraph

Article in Life (Basel, Switzerland), 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Review
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jean Moisés FerreiraLaboratório de Imunopatologia Keizo Asami-LIKA, Centro de Biocièncias, Universidade Federal de Pernambuco (UFPE), Recife 50670-901, Pernambuco, Brazil.ORCID 0000-0002-6554-0337
Barbara Rayssa Correia Dos SantosLaboratório de Biologia Molecular e Expressão Gênica-LABMEG, Departamento de Ciências Biológicas, Universidade Federal de Alagoas (UFAL), Campus Arapiraca, Arapiraca 57300-970, Alagoas, Brazil.
Edilson Leite de MouraLaboratório de Biologia Molecular e Expressão Gênica-LABMEG, Departamento de Ciências Biológicas, Universidade Federal de Alagoas (UFAL), Campus Arapiraca, Arapiraca 57300-970, Alagoas, Brazil.
Ana Caroline Melo Dos SantosLaboratório de Biologia Molecular e Expressão Gênica-LABMEG, Departamento de Ciências Biológicas, Universidade Federal de Alagoas (UFAL), Campus Arapiraca, Arapiraca 57300-970, Alagoas, Brazil.ORCID 0000-0003-0280-6107
Jean Carlos Vencioneck DutraSecretaria de Estado de Educação do Espírito Santo (SEDU), Santa Lucia, Vitória 29056-085, Espírito Santo, Brazil.ORCID 0000-0003-3893-9470
Elaine Virgínia Martins de Sousa FigueiredoLaboratório de Biologia Molecular e Expressão Gênica-LABMEG, Departamento de Ciências Biológicas, Universidade Federal de Alagoas (UFAL), Campus Arapiraca, Arapiraca 57300-970, Alagoas, Brazil.
José Luiz de Lima FilhoLaboratório de Imunopatologia Keizo Asami-LIKA, Centro de Biocièncias, Universidade Federal de Pernambuco (UFPE), Recife 50670-901, Pernambuco, Brazil.

Funding

Fundação de Amparo à Pesquisa do Espírito Santo XXXXX
6 · The paper itself

Abstract

Our aim was to carry out a qualitative and quantitative synthesis of the influence of CCR5 genetic variants on Chagas disease (CD) through a systematic review. A total of 1197 articles were analyzed, and eleven were included in the review. A meta-analysis was conducted along with principal component analyses (PCAs). The polymorphisms found were analyzed using the SNP2TFBS tool to identify possible variants that influence the interaction with gene binding sites. Eleven studied variants were identified: rs2856758, rs2734648, rs1799987, rs1799988, rs41469351, rs1800023, rs1800024, Δ32/rs333, rs3176763, rs3087253 and rs11575815. The studies analyzed were published between 2001 and 2019, conducted in Argentina, Brazil, Spain, Colombia and Venezuela, and included Argentine, Brazilian, Colombian, Peruvian and Venezuelan patients. Eight polymorphisms were subjected to the meta-analysis, of which six were associated with the development of the cardiac form of CD: rs1799987-G/G and G/A in the dominance model and G/G in the recessiveness model; rs2856758-A/G in the codominance model; rs2734648-T/T and T/G in the dominance model; rs1799988-T/T in both the codominance and recessiveness models; rs1800023-G allele and the G/G genotype in the codominance and recessiveness models, and the G/G and G/A genotypes in the dominance model; and rs1800024-T allele. The PCA analyses were able to indicate the relationships between the alleles and the genotypes of the polymorphisms. The SNP2TFBS tool identified rs1800023 as an influencer of the Spi1 transcription factor (

Indexed as

American trypanosomiasischemokinesSNPs

Identifiers

PMID37629534
PMCPMC10455882

What Socratic holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the Socratic graph.